Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1069 |
Symbol | |
ID | 5613042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1269405 |
End bp | 1270457 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640931917 |
Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
Protein accession | YP_001472808 |
Protein GI | 157374208 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATC GAAAGCCCCA GTTCAGACAT CCACGTCTGG AGGTGAACGA TCTAGGTTTA ACTCACAGGG ATTATGAGGG AGCCCTCTCG ACCTTGTGTG CTGGTTGCGG ACACGATGCC ATCACCGCCG CGGTGACGCA GGCCTGCGCC GAGTTATCAC TCCCGCCTCA TCGGATTGCA AAAATATCCG GCATTGGCTG CTCCTCCAAG GCGCCTAACT ACTTCCTCAA TCACGCACAT GGGTTTAATA CCGTACATGG CCGTATGCCG TCGGTGGCAA CAGGTGCGAA TATGGCGAAC CGAGATCTGA TCTATCTGGG GATGTCGGGC GACGGAGACA GTGCGTCTAT CGGCTTTGGT CAGTTCGCCC ATGTGGTTCG CAGACGACTC AATATGCTCT ACATGGTTGC CAATAATGGT GTCTATGGTT TGACTAAGGG GCAACTTGCC GCGACGGCGG AGCAGGGGAT GAAAAATAAG GCTGGAGAGG CCAGTCTGTT TACCGATATC GACCTGTGCG TCAGTGCGCT GCAGTTTGGC GCCACCTTTG TTGCTCGCAG TTTTTCCGGT GATAAGGCTC AACTCGTGCC CCTTATTAAG GCGGCGATAA GCCATAAGGG CTTCGCCTTT ATCGATATCA TCTCCCCCTG CGTCACCTTC AATAACAACC CTGATTCGAC TCGCTCCTAT GACTATGTCC ATGACCATAT AGTCACGGCG GCGGTCGCCG ATTTTGTGCC GGTGAAACAG GAGATCCGCT GTGAGAATGG TGATGCCGAT AGCGAAGATA TCTGTTTACA TGACGGTTCT ATATTACGCC TGTCCCGGAT CCAGCCTGAT TATGACGCCC ATGATCGTCT GCACGCTATG GCCAGAATTG AACAGGTGAA GGCCGAAGGT AAGATATTAA CGGGGTTAAT GTATATAGAT CCGGAAGCCG ATGATTATCA TGAAATTAAC CAGACTACCG ATACCCCTCT CAACGCCCTG AAGCAGGAGA CACTCTGCCC GGGGAATCAT GTATTACAGA CCATAAATGA GAGCTTCAGA TAA
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Protein sequence | MSYRKPQFRH PRLEVNDLGL THRDYEGALS TLCAGCGHDA ITAAVTQACA ELSLPPHRIA KISGIGCSSK APNYFLNHAH GFNTVHGRMP SVATGANMAN RDLIYLGMSG DGDSASIGFG QFAHVVRRRL NMLYMVANNG VYGLTKGQLA ATAEQGMKNK AGEASLFTDI DLCVSALQFG ATFVARSFSG DKAQLVPLIK AAISHKGFAF IDIISPCVTF NNNPDSTRSY DYVHDHIVTA AVADFVPVKQ EIRCENGDAD SEDICLHDGS ILRLSRIQPD YDAHDRLHAM ARIEQVKAEG KILTGLMYID PEADDYHEIN QTTDTPLNAL KQETLCPGNH VLQTINESFR
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