| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1066 |
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| Symbol | |
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| ID | 5613178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1263449 |
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| End bp | 1265566 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931914 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001472805 |
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| Protein GI | 157374205 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TGCCCATCAG TACCAAGTTA CTCTGGATCA CCTCAGCGCT GTTTCTGGCG
ATTGTGACTA TTTTATCCGT CACCTTGTGG TGGGCCTTGA GCAGCAAGAA CGCTGAGATT
GCCAATGAGG TGCAGGAAGT TCTCCATCAG GAGACCAGAG CGAAACTGGA AGCCAGAGCC
GGTGAGTATG GTGAGATGAT TGCGGGGTTT ATTAATGAAG CTTACCGCAT CCCATATTCG
TTTGCGGCAA CGATTGAGCA GTCTTCGGGT ACAGAGCATT TAACCCGGGA AGGGTTAGAG
GTCAGTGTCG CTGCCGTGTT AAAGAAGAAT AGTCAGCTGT CATCTATGTA TGCACAATTT
GAAGCCAATG GTTTCGATGG TAATGACGCT CAATACCTCT CTGGAACGAG CCACAGTGTG
GCGGGGGCGG GGAGTTTAGA GCTGTATTTC GTGCGTAATG ATGACGGCAG TGTCACTCAG
GAGGCGGTGG ATGATGCCGC GGAGAAGTAT GTCACGACGC TGAATGAGTT CGGTATTCGC
GAAGCGGAAT GGTATCTGTG CGCCAAAGAC AGTAAGCGAC CCTGTTTGAT GGAGCCCTAT
CTGTATGAAG TCACACCGGG TCATAACGCC TTGATGACTT CGCTGACGGT ACCTGTAATG
AAAGATGGGA AATTTACCGG ATTAGTGGGC GCCGATCTTA ACCTGCCTAT ATTTCAAAAA
TTGATAAAAG AGCTATCGGG GGAACTGTAT CAAGGCAAGG CTAAGGTGAC ACTACTGAGC
AGCAAGGGGT TAATCGTTGC GGCGAGTCAC TATGACAAGA TGGCGAGACC AGTAAAGGAG
GCGATGAGTG CCGATCTGGC CGGGCAATTG CGGAATCTCC ACAAGGGGGA GAGGTATTTC
GAAAATGACG TTGAGATCGC GGTCGCCTAT CCCATCGATA TTCCGCTGTC TGGCAGTACC
TGGTCGCTGG TGATTGAGGT ACCCAGAGAG GAGGCATTTA AGACCGCCAT GGCGCTTAAT
GATCAGATGC AGGCGATGGC CCAATCATTG GGAAGTCTGC AGCTCACATT AGGCGCGGTC
GTGTCTGTTA TTGCCGTTTT CAGTATCTGG CTGGTGATCC GCAGCATCAT ATCACCACTG
AGGATGATCC AATCCAGAGT CGAAAACCTT GCCAGTGCGG AGGGGGACTT GACTCAATCT
ATCGAGGTCG AGTCACATGC CGAATTGATA GCCTTAGGCA AAGGGTTTAA TGCATTTCTC
ACTAAACTCA GGTTATTAAT CGTCGAGCTA AAACAGTTGG CAAGCCAGTC ACAACAGGAA
AGCCTGACCG TTGCAAATAT TGCGCAGCAA ACCCGAGACA GTGTCAATGG TCAATACGGT
GAGATTGAAA GTGTGGTTAC TGCGGTGAAT CAGATGAGCG CTACGGCACT GGAAGTGGCT
AAAGCCTCGG AGCAGACCGC GATGGAAACC GATGCGATGT CGCAGAATGT GAAGCAGAGT
GAGCATAGCC TGATGACGGC CATGGAGTGT GTGACCACTA TGTCTGAAGA GTCTCTACAG
GCTAAAGAGG CGGTAGGTCG AGTCTCTACA AGCAGCGATA ATATCAGCTC AATCGTTGAG
GTTATCCGCT CAATCGCTGA ACAGACAAAC TTACTCGCAC TTAATGCCGC CATCGAGGCC
GCCAGAGCCG GCGAACAGGG ACGGGGCTTC GCGGTAGTTG CCGACGAAGT GAGAGCCTTG
GCGTCGAAGA CACAGACATC GACAGACGAC ATTACTCAGT TGATCAGCTC GTTGCAGATG
GAGGTGAGTA GTGCCTCTGA TGTGATAGAC AGTGGTGCAG TAAAAGCCCA GCAGGCCGTG
GCTCAAACAG AGGAGGCGCT GGCTTCGATC AACGCCATGG TGGCACAGAT AGATGAGGTC
TCGAGCCAGG TTACCCATAT CGCCACTGCA GCTGAGGAGC AAAGTGCCGT CACCGAAGAG
GTGAATAAGA ATATAACCGG GATCTCTGAT TCCGCATCCG ATCTCGCCAG GCTTGCCGGT
GAAGCGCTGG ATAGCAGTAC TAATCTGGCC GATTTAGTGA AGTCACAGCA TGAGCAGCTG
GGTCGATTGA AGACTTAA
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| Protein sequence | MKHLPISTKL LWITSALFLA IVTILSVTLW WALSSKNAEI ANEVQEVLHQ ETRAKLEARA
GEYGEMIAGF INEAYRIPYS FAATIEQSSG TEHLTREGLE VSVAAVLKKN SQLSSMYAQF
EANGFDGNDA QYLSGTSHSV AGAGSLELYF VRNDDGSVTQ EAVDDAAEKY VTTLNEFGIR
EAEWYLCAKD SKRPCLMEPY LYEVTPGHNA LMTSLTVPVM KDGKFTGLVG ADLNLPIFQK
LIKELSGELY QGKAKVTLLS SKGLIVAASH YDKMARPVKE AMSADLAGQL RNLHKGERYF
ENDVEIAVAY PIDIPLSGST WSLVIEVPRE EAFKTAMALN DQMQAMAQSL GSLQLTLGAV
VSVIAVFSIW LVIRSIISPL RMIQSRVENL ASAEGDLTQS IEVESHAELI ALGKGFNAFL
TKLRLLIVEL KQLASQSQQE SLTVANIAQQ TRDSVNGQYG EIESVVTAVN QMSATALEVA
KASEQTAMET DAMSQNVKQS EHSLMTAMEC VTTMSEESLQ AKEAVGRVST SSDNISSIVE
VIRSIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRAL ASKTQTSTDD ITQLISSLQM
EVSSASDVID SGAVKAQQAV AQTEEALASI NAMVAQIDEV SSQVTHIATA AEEQSAVTEE
VNKNITGISD SASDLARLAG EALDSSTNLA DLVKSQHEQL GRLKT
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