| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1046 |
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| Symbol | |
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| ID | 5610177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1242162 |
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| End bp | 1243388 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931894 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001472785 |
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| Protein GI | 157374185 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.176022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAATTC GAAATAAAAA ATTAATGCAC AACATAGGGC TTCAGGTGGT TATCGCCATG
ATAATTGGTG CATTAGTAGG CCTTTTCATG GGAGAAGGTG CCGCCATATT TGGGCCTCTG
GGTACCATCT TCATTCATCT GATTAAGATG CTGGTCATCC CCTTAGTCGT GGTATCCATT
ATCGCCGGCG CAGCCAGCTT AGGTGACAGC CCCTCGGCAG GAAAGATAGG TATCGGCACC
TTTGCCTTCT TTATTATCAC CTCGGGTGTT GCCGTCACAC TCGCACTGGT CATGGGCAAT
ATATTCAAAC CCGGAGCCGG AGTGGATTTT AGTGCTCACG GTCAATCACT AACCCAAGTC
ACCGCAGAGC AAGGCGCACT GCCAGGCGCC ATGGATACTC TGATTGGCAT GATCCCAACC
AATGTGTTCG AATCTATGAC CTCGGGCAAT ATTCTGCAGA TCCTGGTCTT CTGCATCTTC
TTCGGTATCG CTCTGAGTAA AGTGAAAGGC GATGGTGCCA AGCCCATCAT CAAAAGCCTC
AATACCATAG TTGAAGCCTT CGTATGGATG ATCAACTGCG TGATGGTCAT CGCACCTTTA
GGGGTTTTCG GCCTGATGGC AGAGTCTGTG GGCTCATTCG GATTCCAGGC GCTTGAAGTG
GTCTTGAAGC TATTCGTCGT ATTTGTAGTG GCGATTCTTA TCTATGCCTT CATCTTCTTC
CCCTTGGTAG TGAAGTTCTT CTCCAACGTC CCTGCCATGA AGTTTGTCTC GGCGATGAAG
AAACCCCAGG CGATGGCACT GTCTACCGCA TCATCTATGG CGACTCTGCC GGTCACTATG
GAAACCTGTG AAGAGGAGCT GGATGTATCC AAGGCGACCG CAGCCTTCGT ACTGCCGCTG
GGCGCGACCA TCAACATGAC GGGTAACGCT ATCTACTATG GTCTTGTCGC CATGTTCTTC
GCCCAGATGT ATCATGTCGA TCTGACTATG ACAGCCTATG CCGCCATTAT CTTCACTTCG
ACACTGGGCG CCATAGGTCA AGCCGGTGTA CCTGGTCCCT CCTTCCTGGT CGTTGCAGTG
CTGCTTGCAG CCGGTATCCC GATTGACGGA CTACCACTAC TGTTCGCCCT GGACCGTATA
TTTGACATGA TCCGTACCTC ACTGAACATC ACAGGCGACG CCGTCTGTGC CGTCGTGATG
GATAGGTTCA ACCCGGAACA TAAGTAG
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| Protein sequence | MGIRNKKLMH NIGLQVVIAM IIGALVGLFM GEGAAIFGPL GTIFIHLIKM LVIPLVVVSI
IAGAASLGDS PSAGKIGIGT FAFFIITSGV AVTLALVMGN IFKPGAGVDF SAHGQSLTQV
TAEQGALPGA MDTLIGMIPT NVFESMTSGN ILQILVFCIF FGIALSKVKG DGAKPIIKSL
NTIVEAFVWM INCVMVIAPL GVFGLMAESV GSFGFQALEV VLKLFVVFVV AILIYAFIFF
PLVVKFFSNV PAMKFVSAMK KPQAMALSTA SSMATLPVTM ETCEEELDVS KATAAFVLPL
GATINMTGNA IYYGLVAMFF AQMYHVDLTM TAYAAIIFTS TLGAIGQAGV PGPSFLVVAV
LLAAGIPIDG LPLLFALDRI FDMIRTSLNI TGDAVCAVVM DRFNPEHK
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