Gene Ssed_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0992 
Symbol 
ID5609902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1175561 
End bp1175980 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content45% 
IMG OID640931840 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001472731 
Protein GI157374131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATC TCGAACACGT AAACTTAGTC GTTGAAGATA TCCCTAAAAC ACTGCACTTT 
TATCGTGCAG CATTTCCCCA TTGGAAAGTT CGGGGGGGCG GAGAGGGAAG CTGGCACGGT
AAACCCAGAG ACTGGGTCCA TTTCGGTGAC GACTACCAAT ACTTAACCTT TAACAATGAT
GGAGTCGGTG AAAACCGCGA CCTAACGGGT CATCAAATTG GGCTGGCTCA TTTCGCATTT
GTCACCGATG ACCTGGATGC AATCATCGAA CGACTGGATA AGGCTGGATA CCCGGTTGAT
AAAGAGGGTG CTGAAGATGA TTTCAGGCGT AATGTTTACT ACATAGATCC AAATGGCTAT
GAAGTTGAGT TTGTACAGTA TCTAAGTGAT ATTCCGTCTG AGCGAAATAG ATACGACTAA
 
Protein sequence
MIHLEHVNLV VEDIPKTLHF YRAAFPHWKV RGGGEGSWHG KPRDWVHFGD DYQYLTFNND 
GVGENRDLTG HQIGLAHFAF VTDDLDAIIE RLDKAGYPVD KEGAEDDFRR NVYYIDPNGY
EVEFVQYLSD IPSERNRYD