Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0992 |
Symbol | |
ID | 5609902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 1175561 |
End bp | 1175980 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931840 |
Product | glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_001472731 |
Protein GI | 157374131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACATC TCGAACACGT AAACTTAGTC GTTGAAGATA TCCCTAAAAC ACTGCACTTT TATCGTGCAG CATTTCCCCA TTGGAAAGTT CGGGGGGGCG GAGAGGGAAG CTGGCACGGT AAACCCAGAG ACTGGGTCCA TTTCGGTGAC GACTACCAAT ACTTAACCTT TAACAATGAT GGAGTCGGTG AAAACCGCGA CCTAACGGGT CATCAAATTG GGCTGGCTCA TTTCGCATTT GTCACCGATG ACCTGGATGC AATCATCGAA CGACTGGATA AGGCTGGATA CCCGGTTGAT AAAGAGGGTG CTGAAGATGA TTTCAGGCGT AATGTTTACT ACATAGATCC AAATGGCTAT GAAGTTGAGT TTGTACAGTA TCTAAGTGAT ATTCCGTCTG AGCGAAATAG ATACGACTAA
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Protein sequence | MIHLEHVNLV VEDIPKTLHF YRAAFPHWKV RGGGEGSWHG KPRDWVHFGD DYQYLTFNND GVGENRDLTG HQIGLAHFAF VTDDLDAIIE RLDKAGYPVD KEGAEDDFRR NVYYIDPNGY EVEFVQYLSD IPSERNRYD
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