| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0980 |
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| Symbol | |
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| ID | 5609598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1163003 |
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| End bp | 1164295 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931828 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001472719 |
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| Protein GI | 157374119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.41247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACGAC TTTTTATCAG TCTTTACCTG CTACTAAGCC TCAGTGTTTT AGGTATAGGT
TGGACACTCG ATAGCATTTG GCAAAATAAT GTCGAAGAGA GTGGTGCATT AGATGCACCA
CTTATCGCTT TGGCGCAGCT GCTGGCTAAG CTCCCCGAAG AGCAGCGTCA TTTTTATCTT
CAAGAGTTAA AACAAAACCC TGACTACCCC ATCAAGCTGA TTGATGCCAG TCAAATAGCG
ATATCGGACC AAAGCACACT CACTGCAAAC AGTGTGCTTA TCACCGAGCA AGACGATGAC
CATGAGCTGC ATTTCGTTAA AGTAAACGAT CAGATCTTAG TCGCCGGCCC CATCGAGATA
GATCCCCGAA AGAGATTACG CGGGTTATTC ACCCTATTCT TCTACCTCTC TTTAGCCTTT
ATTGCCTTAA TCTGGGTTTG GCCACTCTCG AGGGATATTA AGACTCTGAG AAACGCGACT
AAGGAGTTTG GTCAGGCAAA TTGGGACACA CAGATAACCT TATCATCCCG CTCTCAGGTG
CTGCCTCTGG CTATCACCTT TAATGAGATG GCACAGCAGA TCAGTACCCT TATCGAGAAT
CAGAAACACC TTTCGAACGC CGTTTCCCAT GAGATCCGTA CCCCACTTGC CAGACTGAAG
TTTGCCTTGG CCTTAATGCC GCAATATTGC AAGCCCGACT CAGACGTGCA GCGAAGAACA
GATTTTTTGA ACGATATGCA GCAGGATGTG AAGGAGATGG AGAATCTACT CCAGGAGCTC
TTAACCTACG CTAGCCTCGA GTCACAACGT AAAGAGGTTC AACTCGAACA TTGTGACCTC
AGCGTATTAA CTAAACAAAC CGTCGATAGG CTATCGTCAA CCATATCGGC CCCGATTGAG
TTTGAAAACA GCGATACCCC AGTCTATCTC ATGGGCGACC CCTCTCTCAT CGAAAGGGCG
ATACAAAATC TGATCACCAA TGCCCAACGA TTCGGGCGTC AATCCATTCA GGTTGAGATA
AAGCAGACTC GAGAACTGGT ATCACTATCG GTTGCAGACG ATGGTCAGGG AATACCGCTT
GAAGACCAAT GCAAGATATT TGAACCCTTC TATCGCAGTC AGTCAGTACA GAATGGTAAT
AAAGGCCACG GGTTAGGCCT GGCAATCATC AAGCGGATCA TGGAACGTCA CAACGGTAAG
GTGACTCTGG AAAGCCGGGA TGGATACACC TGCTTCACAC TTATCTGGCC CACACCGGCC
CAGGCTAAGA ATAAGAGTCA GGTAAAAAAA TGA
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| Protein sequence | MKRLFISLYL LLSLSVLGIG WTLDSIWQNN VEESGALDAP LIALAQLLAK LPEEQRHFYL
QELKQNPDYP IKLIDASQIA ISDQSTLTAN SVLITEQDDD HELHFVKVND QILVAGPIEI
DPRKRLRGLF TLFFYLSLAF IALIWVWPLS RDIKTLRNAT KEFGQANWDT QITLSSRSQV
LPLAITFNEM AQQISTLIEN QKHLSNAVSH EIRTPLARLK FALALMPQYC KPDSDVQRRT
DFLNDMQQDV KEMENLLQEL LTYASLESQR KEVQLEHCDL SVLTKQTVDR LSSTISAPIE
FENSDTPVYL MGDPSLIERA IQNLITNAQR FGRQSIQVEI KQTRELVSLS VADDGQGIPL
EDQCKIFEPF YRSQSVQNGN KGHGLGLAII KRIMERHNGK VTLESRDGYT CFTLIWPTPA
QAKNKSQVKK
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