| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0962 |
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| Symbol | apaH |
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| ID | 5610592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1144581 |
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| End bp | 1145405 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931810 |
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| Product | diadenosine tetraphosphatase |
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| Protein accession | YP_001472701 |
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| Protein GI | 157374101 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATT ATTTTGTTGG TGATATTCAA GGATGCTTCG AAGAGTTACA GCTCCTCCTG
AATAATGTCG ACTTTAACCC ATCAAAAGAT CAGCTTTGGG CTGTCGGGGA TCTTGTGGCA
AGAGGCCCGG GGTCGCTGGA AACCCTACGT TACTTTCGGC AACTTGAAGG CTCTGGACGA
GTGGTGCTGG GAAATCATGA CCTTCACCTT CTTGCGGTTA ATGCCAAAAT TAAGAGAGCC
AATCCCAATG ACAAGCTCGG CCCGTTACTC ACTGCACCCG ATATTGGCTC TCTGATTGAC
TGGTTACGAA TGCAACCACT TTACCAAGAG CTGCCTGAGC ATAATCTGGT GATGACTCAT
GCGGGAGTTC CTCCCCAGTG GAGTCTTGAA ACCTTAAGAG AGGAGGCGGA CCATGTTGCT
GCAGCGCTGA GATCAGATGA TTACCTCACC TCTCTTATCT GTCATATGTA TACTAATGGT
TCAAATTGCT GGCACGACTC CATGTCTGAA TTAGAGCGTA AAATATACTG CATCAATGCC
CTGACACGAA TGAGGTTTCT GCACAGTGAT GGGAGGCTCG ACTTTGACTG CAAACTACCT
CCATCGGCAT GTGAAGACCC CGATCTATCA CCTTGGTTTG AGCACTCAGG TTTGCTGAAC
TCCACGCATA CATTAGTCTT CGGACATTGG GCCGCCGTGA TGGGAAAAGT ACCGTCAAGT
ACAATACATG CTCTCGATAC GGGTTGTTGT TGGGGAGAGC ATCTGACTCT CTGGCATTTA
GAATCCAATC AAAAAATAAC CCAAAACAAG TTAAAAAAGA GTTAA
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| Protein sequence | MAHYFVGDIQ GCFEELQLLL NNVDFNPSKD QLWAVGDLVA RGPGSLETLR YFRQLEGSGR
VVLGNHDLHL LAVNAKIKRA NPNDKLGPLL TAPDIGSLID WLRMQPLYQE LPEHNLVMTH
AGVPPQWSLE TLREEADHVA AALRSDDYLT SLICHMYTNG SNCWHDSMSE LERKIYCINA
LTRMRFLHSD GRLDFDCKLP PSACEDPDLS PWFEHSGLLN STHTLVFGHW AAVMGKVPSS
TIHALDTGCC WGEHLTLWHL ESNQKITQNK LKKS
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