| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0928 |
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| Symbol | |
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| ID | 5612120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1110346 |
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| End bp | 1110720 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931776 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472667 |
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| Protein GI | 157374067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3112] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000245839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATATG AATTTCGGCG CAATACCTTA ACGGGAACCG TGCTTGCCAC TTTTAGTATG
GATCATGAGG CGTTGGGCTT TTGGTTTGCA GAGGAACTCG GTGAAGATAC TGATAAATAC
GTCGAAATTT GTCAGGTAAT AGCACAGCTG CAGTCTAGTC GCCTTCCTCA ATGGAGATGG
GTTGGCAAAG CGTTATCGAT AGAACTCGAC GGTGAGCAAG CCAGAGTATT TGCCAATGAA
CTCGAAAATG GTGAAGAGCT TGAGTTCGAG GAATCACTGT CACTCTATGA TGGCGAATCG
GAAGCATTTT GTGGCTTAGA GGATTTTTAT GACGTCTTGG TGAAATGGCG AGAGTTTTTA
GACGAGACTC GTTAA
|
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| Protein sequence | MEYEFRRNTL TGTVLATFSM DHEALGFWFA EELGEDTDKY VEICQVIAQL QSSRLPQWRW
VGKALSIELD GEQARVFANE LENGEELEFE ESLSLYDGES EAFCGLEDFY DVLVKWREFL
DETR
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