| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0925 |
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| Symbol | |
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| ID | 5612495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1106770 |
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| End bp | 1107765 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931773 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | YP_001472664 |
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| Protein GI | 157374064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.937263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA ATCAAAATAT CGACTTCGTC TCAATCGTAA TACCTGTTTA TAACGAAGAA
GCGAGTTTAC CCGAACTCCT CAGCCGTACC CTTGCCGCGG CAGATAGTAT GGGAAAGCAT
TATGAATTAG TGCTCATAGA TGATGGTAGC CGTGACAATA GCGCCAATAT CATTGAAGCC
GCAGCTGCAG AGCCTGACAG CCATGTAGTA GGGATCATCT TAAACCGTAA CTATGGTCAA
CATAACGCCA TCATGGCAGG GTTCGAACAT GTTCGCGGCG ACCTCATCAT CACCTTAGAT
GCCGATCTTC AAAATCCACC TGAAGAGATC CCTAACTTAG TCGCTAAAGC CGAAGAGGGT
TACGATTCTG TCGGTACGGT CAGACGTCAT CGCCAAGATA GTGCACTACG ACGTTACCCT
TCAAAGCTTA TCAATAAGCT GGTTAAACGT TCGACCGGCG TTGAGATGAA TGACTATGGT
TGTATGTTAC GAGCCTATCG ACGTCATGTC GTCAAGGCAA TGCTCGAATG CCATGAGAGA
AGTACCTTTA TCCCTATTCT AGCTAACGGC TTCGCGCGCC ACACAGCAGA GATCGATGTG
CATCACAGTG AAAGATCCCA GGGTGAGTCA AAGTATGGCT TTATGAATTT GATTAATCTC
ATGTTTGATC TGCTGACCAG CATGACAACA GCCCCACTGC GTATGTTGAG CATCGTGGGT
GGCGGCATTG CATCTTTCGG TATTCTATTT GGCCTGTTTT TGATCTTATT ACGATTGATT
TACGGCGCAG AATGGGGGGT AGATGGTGTG TTCCCACTCT TTTCAATATT GTTCATCTTT
ATCGGTGCAC AGTTTGTCGG CCTGGGATTA CTGGGTGAAT ACATAGGCCG AATCTATTCC
GATGTTCGTG CAAGGCCCAG ATACTACGTA CAAGACATAT TGGTAGGCGA AGCCACAAAA
GGCGCTCGTA TATCTGACGA GAACAAAAAC AATTAA
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| Protein sequence | MKHNQNIDFV SIVIPVYNEE ASLPELLSRT LAAADSMGKH YELVLIDDGS RDNSANIIEA
AAAEPDSHVV GIILNRNYGQ HNAIMAGFEH VRGDLIITLD ADLQNPPEEI PNLVAKAEEG
YDSVGTVRRH RQDSALRRYP SKLINKLVKR STGVEMNDYG CMLRAYRRHV VKAMLECHER
STFIPILANG FARHTAEIDV HHSERSQGES KYGFMNLINL MFDLLTSMTT APLRMLSIVG
GGIASFGILF GLFLILLRLI YGAEWGVDGV FPLFSILFIF IGAQFVGLGL LGEYIGRIYS
DVRARPRYYV QDILVGEATK GARISDENKN N
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