| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0902 |
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| Symbol | |
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| ID | 5613060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1078213 |
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| End bp | 1078647 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931750 |
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| Product | LrgA family protein |
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| Protein accession | YP_001472641 |
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| Protein GI | 157374041 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000398223 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTGACAG CTGAACGTAC TAAAAAGTGT TATGGGGTTC TTCAATTACT GATCCAGATC
GGACTATTTT GTCTGTTAGC CTGGGGGATG GAGCAGGTCT CGGTTTATTT GGAACTTCCT
GTTCCTGGCA GCGTGTTGGG GCTCGCTATC CTGTTATTGT TAATGGGGTT AAAGCTGGTA
CCTGAGAAGT CGGTCAAACT TGGCGCGGGA TGGTTAACGG GTGAGTTACT GCTATTTTTC
ATTCCTCCTG TTATCTCAAT TATTAAGTAT GAAAGCCTAT TCGAGCAATA CTCGGCTCCT
TTGATGCTCA CATTAGTGAT TGGCAGTGTC TGTGTATTAC TCGGTACCGG ATTTGTGGTC
GATAGGGTCT TCAGGTTTGA AACTAAGATG AACAGTAAAC GCCTTAATGC AGCAAAAGCG
ATAGAGGTAA TATAG
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| Protein sequence | MLTAERTKKC YGVLQLLIQI GLFCLLAWGM EQVSVYLELP VPGSVLGLAI LLLLMGLKLV
PEKSVKLGAG WLTGELLLFF IPPVISIIKY ESLFEQYSAP LMLTLVIGSV CVLLGTGFVV
DRVFRFETKM NSKRLNAAKA IEVI
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