| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0897 |
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| Symbol | |
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| ID | 5614076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1072670 |
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| End bp | 1073674 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640931745 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472636 |
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| Protein GI | 157374036 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000332189 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAAGGA AACATCAAGT TTTTGTGTCA TCGACCTATA AAGATTTAGT CGAAGAGCGT
AAAGAAGTTA TTCATGCCTT ATTGGAGCTA GATTGTATTC CAGCAGGGAT GGAGTTGTTT
CCTGCCACTG ATGAAGATGC ATGGTCTTTA ATAAAAGAAG TTATTGATGA TTGCGATTAT
TATTTGTTAA TCATCGCTGG AAAATATGGT TCAGTAAATG TTGAAGGTAT TGGATATACC
GAAATGGAAT TCGATTATGC CATTCTTCAA GGCAAACCCG TAATGTGTTT TGTACATGAA
AGTATTGAAG AACTTAAAGT AAGTAAAGTA GAAACCTCAG AGCTAGCTAA AGAACGTTTA
AATTTATTTC GGAGTAAAGC ACAAGAAAAG CATTGTAAAT TTTGGGTGTC CGCTCATGAT
TTAGGAGGAA AAGTATCCAG AAGTCTTATC CAGCTAAAGA AGAAACACCC TTCTGATGGT
TGGGTGCCAG GTCGATATGC AGCGGATCAA AAAATGTTAG CTGAGATGGA AAAAATGAGA
AGTAAAGTTT CCGAGCTTGA AATGGAGCTG ATGATATCTA AAGACCCCAA ACCTGCTAAC
TTTGATGAAT TGGAAAGTGG TAGTGATATT TATTCTTTTC CATTCGGTTT ATTCACGGAT
AAAACTAGGA AAGAAAGGGA GTCTGTTAAT TTAGGAGTTA CTTGGGATAA GCTTTTTTCC
TATTGTGGTA CAGTTTTGTC TGGGGAGTGC ACGAAAGAAG AATTAGCTGA AAAAATCAAG
CTGGCTTATT ATCATGCAAT CCCTAAAGAA CTTAAAGACT TAGTAAAATA TGAAGATATT
GTTTTACCTT TTGTATTAAT AGATCAAATT CATGTTCAAT TTCAAGCTCT CGGGCTGATG
ATAACCGGTC AGAAAAAAAG GGCTGTAGCA GATAAAAATA CTTATTGGGC GCTTACTTCG
TTTGGTGAAA AGTACTTAAT TCAAATAAGA GCGTTAACAA GGTAA
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| Protein sequence | MERKHQVFVS STYKDLVEER KEVIHALLEL DCIPAGMELF PATDEDAWSL IKEVIDDCDY
YLLIIAGKYG SVNVEGIGYT EMEFDYAILQ GKPVMCFVHE SIEELKVSKV ETSELAKERL
NLFRSKAQEK HCKFWVSAHD LGGKVSRSLI QLKKKHPSDG WVPGRYAADQ KMLAEMEKMR
SKVSELEMEL MISKDPKPAN FDELESGSDI YSFPFGLFTD KTRKERESVN LGVTWDKLFS
YCGTVLSGEC TKEELAEKIK LAYYHAIPKE LKDLVKYEDI VLPFVLIDQI HVQFQALGLM
ITGQKKRAVA DKNTYWALTS FGEKYLIQIR ALTR
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