| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0877 |
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| Symbol | |
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| ID | 5613936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1044805 |
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| End bp | 1045869 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931725 |
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| Product | fructose-1,6-bisphosphate aldolase |
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| Protein accession | YP_001472616 |
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| Protein GI | 157374016 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
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| TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000290228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAA TTTCCCTACG TCAAATGCTA GATCATGCTG CAGAACATGG TTATGGCGTC
CCCGCTTTTA ACGTAAACAA CCTTGAGCAG ATGCGTGCCA TCATGCAAGC TGCTGAGGCG
ACCGATAGCC CTGTTATCGT TCAGGCTTCG GCAGGTGCAC GTAAGTATGC TCGTCCTCAG
TTTCTTAAGT ATCTGATGGC CGCTGCACTT GAGCAGTACC CTGATATCCC TGTGTGTATT
CACCAGGACC ATGGTACCGA TCCTGATATT TGTCAGCGTT CGATTCAGTT AGGCATGTCA
TCGGTAATGA TGGACGGTTC ATTGATGGCA GACGGTAAGA CTCCTGCTTC ATATGAGTAT
AACGTCGACG TTACCCGCAA GACGGTAGCT TTTGCTCACG CTTGTGGTGT CTCAGTTGAA
GGTGAAATCG GTTGTTTGGG TAGCCTTGAA ACGGGTGAAG CCGGTGAAGA AGATGGGATC
GGTGCTGCAG GTATTTTGAG CATGGACCAG ATGCTAACCA CACCTGAAGA GGCAGCGCGT
TTCGTTGCCG ATACTCATGT CGATGCATTG GCTATTGCCA TTGGTACCAG TCATGGTGCG
TATAAGTTTA GCCGTAAACC TACCGGCGAT GTACTGCGTA TCGACCGCAT TAAAGAGATC
CACGCGCGTA TTCCTAACAC TCACCTGGTG ATGCATGGTT CTTCATCGGT ACCTCAGGAG
TGGCTCAAGG TCATCAATGA GTACGGTGGT GAGATGCCTG AAACTTACGG TGTTCCTCTA
GAGGAGATCG TTGAAGGTAT CAAGCATGGC GTTCGTAAGG TCAATATCGA TACCGATCTG
CGCTTGGCAT CTACGGGAGC TGTGCGTAAA TTCCTTGCAG AAAACCCAAG TGAATTTGAT
CCACGTAAAT TCCTTAAGGC GTCTATGGAA GCGATGGCTG ACATCTGTAC TACGCGCTAT
GAAGCCTTTG GTTGTGCCGG CATGGGCTCT AAGATTAAGC CTAAGTCACT GCAGGCTATG
TATAAAGCAT ACCAGTCAGG TGAACTTGAT CCGCAGATTA AATAA
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| Protein sequence | MALISLRQML DHAAEHGYGV PAFNVNNLEQ MRAIMQAAEA TDSPVIVQAS AGARKYARPQ
FLKYLMAAAL EQYPDIPVCI HQDHGTDPDI CQRSIQLGMS SVMMDGSLMA DGKTPASYEY
NVDVTRKTVA FAHACGVSVE GEIGCLGSLE TGEAGEEDGI GAAGILSMDQ MLTTPEEAAR
FVADTHVDAL AIAIGTSHGA YKFSRKPTGD VLRIDRIKEI HARIPNTHLV MHGSSSVPQE
WLKVINEYGG EMPETYGVPL EEIVEGIKHG VRKVNIDTDL RLASTGAVRK FLAENPSEFD
PRKFLKASME AMADICTTRY EAFGCAGMGS KIKPKSLQAM YKAYQSGELD PQIK
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