| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0876 |
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| Symbol | pgk |
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| ID | 5611872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1043400 |
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| End bp | 1044575 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931724 |
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| Product | phosphoglycerate kinase |
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| Protein accession | YP_001472615 |
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| Protein GI | 157374015 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0126] 3-phosphoglycerate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000236749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATTA TCAATATGTC AGAGTTAGAT CTCCAAGGTA AGCGAGTGCT TATTCGTGAA
GATCTTAATG TACCAGTCAG CGACGGCGTG GTGACCAGTG ATGCGCGTCT TCGTGCTGCA
CTGCCTACTA TCAAGCTTGC ACTCGAGAAG GGTGCCGCCG TTATGGTCAT GTCTCACCTT
GGTCGTCCGA CTGAAGGTGA ATTCAATGCA GAGTTTTCAC TGCAACCTGT CGTTAATTAC
CTGACCAAAG CGCTAGAGTG CCCGGTGCGT CTGGCTAACG ATTACCTCGA TGGCGTCGAA
GCCAATGTGG GCGAACTTGT TGTATTTGAA AACGTTCGCT TCAATGTCGG TGAGAAGAAA
AACGACGAAG CTTTAGCTAA GAAACTAGCC GCACTATGTG ATGTCTATGT GATGGATGCC
TTCGGTACCG CTCATCGTGC ACAGGCATCG ACTCATGGCG TCGGTCTGCA TGCCCCTGTG
GCTTGTGCGG GTCCGCTACT TGCCGGTGAG CTTGAAGCAC TGGGTAAGGC GATGGATAAT
CCTGCTCGTC CATTAGTTGC CATCGTTGGT GGCTCAAAAG TGTCGACTAA GCTTACCGTT
CTCGAGAGCC TTTCCGGCAT CGTAGATCAG CTTGTTGTTG GTGGCGGAAT CGCGAATACC
TTTATTGCAG CAGCGGGACA CGAAGTGGGT AAATCACTTT ACGAAGCCAA TCTGATTGAA
GAAGCTAAGC GTCTTGTGGC TAACGCTCAG AGCCGTGGTG GCGATATCCC GGTACCGACC
GATGTGGTTG TAGCCGGTGA GTTTAGCCCA ACAGCGAGTG CGACACTTAA AGACGTTAGT
GAAGTCACCA GCGACGATAT GATCTTCGAT ATCGGTCCTG ATAGCGCAGA AGCATTATCT
GAAATATTAA AGAATGCAGG AACCATCGTA TGGAATGGTC CTGTCGGCGT ATTCGAGTTC
GATCAGTTTG GTGAAGGTAC CAAGCGTATC GCTCAAGCGA TTGCTGAGTC TGATGCATTC
TCGATTGCCG GTGGTGGTGA TACGTTAGCG GCTGTTGATA AGTACGATAT TGCAGACAAA
GTTTCATATA TCTCAACGGG TGGCGGTGCA TTCCTCGAGT TCCTCGAAGG AAAAGAGTTG
CCAGCCGTTG CTATGCTTGA GTCTCGCGGC GAATAG
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| Protein sequence | MAIINMSELD LQGKRVLIRE DLNVPVSDGV VTSDARLRAA LPTIKLALEK GAAVMVMSHL
GRPTEGEFNA EFSLQPVVNY LTKALECPVR LANDYLDGVE ANVGELVVFE NVRFNVGEKK
NDEALAKKLA ALCDVYVMDA FGTAHRAQAS THGVGLHAPV ACAGPLLAGE LEALGKAMDN
PARPLVAIVG GSKVSTKLTV LESLSGIVDQ LVVGGGIANT FIAAAGHEVG KSLYEANLIE
EAKRLVANAQ SRGGDIPVPT DVVVAGEFSP TASATLKDVS EVTSDDMIFD IGPDSAEALS
EILKNAGTIV WNGPVGVFEF DQFGEGTKRI AQAIAESDAF SIAGGGDTLA AVDKYDIADK
VSYISTGGGA FLEFLEGKEL PAVAMLESRG E
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