| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0856 |
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| Symbol | |
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| ID | 5613418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1020048 |
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| End bp | 1021106 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931704 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_001472595 |
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| Protein GI | 157373995 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTCG CAACTAATCA AGAGGGTTGG GTAGCAGTGT TGAATAGCAA AAGTGATATT
TTTAGCAAAG ACAAGGCTGA GCAGGTACAG GGCTCTGGCC TTAGAACACT ATCGAGACAC
TTAGTCAGGC AATTAGGCAT GCTCAATTCG GCGTGTGGCG ATCTGCCACT CTCTCCGGTT
CAAGCCCACG CGTTGATCGA GCTCAGGCAT CAGGCAATTC CAATAAAACA ACTCGCCCAA
ACACTCAACA TAGATAAGTC TAATGCCAGT AGAGCCATCA CAAACTTGGT GGAAAAAGGG
CTTGCGCAAA CTAAGAGCAA CCCCAAAGAC AGCAGAAGTT TACTCGCCCA CCTGACCCCC
CAGGGGAAAA AGTTGCTTCA CAAGCTGGAT CTGCAGCAAA ACATTGTGTT CGAACAGATC
CTGTCGCAAC TTTCAACCGA AGAGACAAAA CAGATAGAGA GTGCAATAAC CCTATATCAC
AAAGCGATTT GCCGCTCTCA AGCTCAACAG GGATTGACCA TCCGCGAGAT AAAGCCAAAA
GATGATGAAG CTATGGCTCA GATCATTCGC GAAGTATCTG CCGAATATGG TCTCACTGCT
GACAAAGGCT ATGGTGTATC AGATCCCACT CTGGACTCCC TCAGCCAGGA GTATCGAGCC
GAAAATGCCT GCTACTGGGT GATAGAGGAG GATGGTGTAT TACTGGGCGG CGGGGGGATT
GCACCACTAA ACGCTAAAGC GAACCCTGTT GAAAGTGATG GTATTAAATC AGAGCCTGAG
TCAAAGAGCG CTTTCGAAGA TGGAGTTTGC GAGCTTCAGA AGATGTATTT TTCACACCAA
CTTCGCGGTA AGGGGTTAGC GAGACGCCTC GCCTATCAGG CGATCGACTT CGCTCGTGAA
CGCGGTTATC ACTCCTGTTA CTTAGAGACC ACTGCTTGCC TAAATGAAGC CGTTAAGCTG
TATGAATCAA TTGGCTTCGA ACATCTGCAG TCTCACCTAG GCAATACCGG CCATGACGCC
TGTGAAATGC CGATGTTATT GAAGTTAACG AAAAACTGA
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| Protein sequence | MLVATNQEGW VAVLNSKSDI FSKDKAEQVQ GSGLRTLSRH LVRQLGMLNS ACGDLPLSPV
QAHALIELRH QAIPIKQLAQ TLNIDKSNAS RAITNLVEKG LAQTKSNPKD SRSLLAHLTP
QGKKLLHKLD LQQNIVFEQI LSQLSTEETK QIESAITLYH KAICRSQAQQ GLTIREIKPK
DDEAMAQIIR EVSAEYGLTA DKGYGVSDPT LDSLSQEYRA ENACYWVIEE DGVLLGGGGI
APLNAKANPV ESDGIKSEPE SKSAFEDGVC ELQKMYFSHQ LRGKGLARRL AYQAIDFARE
RGYHSCYLET TACLNEAVKL YESIGFEHLQ SHLGNTGHDA CEMPMLLKLT KN
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