Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0846 |
Symbol | |
ID | 5613200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1009500 |
End bp | 1009817 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931694 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001472585 |
Protein GI | 157373985 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA GTAATATTTT GAGTGAGCTT CCATCAGACC TTTCTATGGA AGTGTTCGAG CAGATCGGCG GCAACGACAA GGTGTTAATC GAACGTATTA TCTCTAAGGC TCATGTGACT CCTGAGGGGC AATGGTACGA TCAAGATAGA AGCGAGTGGG TGATGGTGTT GAAGGGGGAA GCCAAGTTAC AGTTTGAGCA TGGTGAGCTT ATACACCTGC AAGCGGGTGA TTATGTCGAT ATTGAGGCAC ATAGAAAACA TAGGGTGAGC TGGACCAGCG AAGAGACCGA AACTGTATGG TTAGCAGTGC ATTACTGA
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Protein sequence | MNKSNILSEL PSDLSMEVFE QIGGNDKVLI ERIISKAHVT PEGQWYDQDR SEWVMVLKGE AKLQFEHGEL IHLQAGDYVD IEAHRKHRVS WTSEETETVW LAVHY
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