Gene Ssed_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0846 
Symbol 
ID5613200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1009500 
End bp1009817 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content46% 
IMG OID640931694 
Productcupin 2 domain-containing protein 
Protein accessionYP_001472585 
Protein GI157373985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA GTAATATTTT GAGTGAGCTT CCATCAGACC TTTCTATGGA AGTGTTCGAG 
CAGATCGGCG GCAACGACAA GGTGTTAATC GAACGTATTA TCTCTAAGGC TCATGTGACT
CCTGAGGGGC AATGGTACGA TCAAGATAGA AGCGAGTGGG TGATGGTGTT GAAGGGGGAA
GCCAAGTTAC AGTTTGAGCA TGGTGAGCTT ATACACCTGC AAGCGGGTGA TTATGTCGAT
ATTGAGGCAC ATAGAAAACA TAGGGTGAGC TGGACCAGCG AAGAGACCGA AACTGTATGG
TTAGCAGTGC ATTACTGA
 
Protein sequence
MNKSNILSEL PSDLSMEVFE QIGGNDKVLI ERIISKAHVT PEGQWYDQDR SEWVMVLKGE 
AKLQFEHGEL IHLQAGDYVD IEAHRKHRVS WTSEETETVW LAVHY