| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0804 |
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| Symbol | sspA |
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| ID | 5610285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 952952 |
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| End bp | 953581 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931652 |
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| Product | stringent starvation protein A |
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| Protein accession | YP_001472543 |
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| Protein GI | 157373943 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000607549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0080229 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTGTTG CTGCCAATAA ACGCTCAATC ATGACCCTGT ATTCAGGTGC AGATGATCTC
TATAGTCACC AAGTTCGTAT CGTCTTGGCT GAAAAGGGGG TGACTGTTGA TGTGCTACAG
GTTGATCCAA GTGAGATGCC TGAAGATTTA ATCGAACTAA ACCCTTATAA CACAGTGCCT
ACACTAGTTG ACCGTGAGTT AGTGCTTTAT AACTCTCGTA TCATCATGGA GTACTTGGAC
GAGCGTTTTC CGCATCCGCC TCTTATGCCC GTTTATCCGG TATCTCGTGG TCGTACCCGT
TTAATGATGA ACCGTATCGA AACTGATTGG TACTCATTAG TCGATCGTAT CAGGAGTGGT
GACCGTGCCG ATGAAGCTCG TAAAGAGCTT AAAGAGAGCC TAACCGCTAT CGCTCCGGTA
TTCTCTGAGA TGCCATACTT TATGGCCGAA GAGTTTGGAT TGGCCGATTG CTATCTTGGT
CCACTGCTTT GGCGTTTACC TGTACTCGGT ATCGAACTCG ATATGCGTAC AGCTAAAGAA
GTTAAGGCCT ACATGACACG CTTGTTCGAT CGTGAGTCAT TTAAAGCATC TTTAACTGAG
ACCGAGCGCG AAATGCGCAT GGGTATCTAA
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| Protein sequence | MAVAANKRSI MTLYSGADDL YSHQVRIVLA EKGVTVDVLQ VDPSEMPEDL IELNPYNTVP
TLVDRELVLY NSRIIMEYLD ERFPHPPLMP VYPVSRGRTR LMMNRIETDW YSLVDRIRSG
DRADEARKEL KESLTAIAPV FSEMPYFMAE EFGLADCYLG PLLWRLPVLG IELDMRTAKE
VKAYMTRLFD RESFKASLTE TEREMRMGI
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