| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0660 |
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| Symbol | |
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| ID | 5612951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 799872 |
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| End bp | 801038 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931505 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472400 |
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| Protein GI | 157373800 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000211177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGT TTTTATTGTT AACCCTGTGC GCTTTTTCAA ATCTGGCTGT CGCCGTTGAA
CCTCTGATTG AAACCCCTGA GAACATGGAA CCGACATTTG TCGATGATAT CTTGTCAGTG
TTTGGTGCCG ACGGTGAGTT TGATCAAAGC AAAGCCATCG ATATGAGTTA CCTGCCAACG
GCGTATTACA CGCCGGAGAA GAAGTTTGGT GTCGGGCTGT TGATGGTGGG CCTGTATAAC
ACCGATGGTG CATCGAGTGA AGAGCAGCCT TCTTCATTAG TGTTGAATTC GTTTGTATCG
ATGAACAACT CTTATGGTGT CGAAGTTGAA AACATGACAT TTTTCAACGG CGGCAAGCAG
CGATTACTGC TGGGGTTAGA GTTACATAAT GAAGCAGCGG TTTACTATGG CCAAGGTATC
GAACAAGGTG ATCTAGACGG TAATCACCAT GAGTTTGAAG AGCAGTTATA CAGCTTCAAA
CCTCGTTGGA TGACTGAAGT TGCCGATAAC TATTTTATAG GCGTCGGTGC CGATTTTACT
TACGCCAGTG CAGAAAAGTT AGAGTTGGTG GAAACGGGAG CCCCTGTGGA TTCTGGTGAT
ATTTTGCCAA ATAACTTCAG CACCGGTGTG GTTGTTACCA GTATCTATGA TTCGCGAGAT
TATCGATTAA ATGCCACTAA GGGCTGGTTA TTTCAAATTG ATGCCGGCCT ATATCAAAAC
AGTGAGTACT CGACGTTTTC GACTTATGAT ATTGAGTTAG CAAACTATAT CGACTTGAGC
TCAACATCTT TACTGAGCTC AGCGCCAGGG CTTATCGCCT GGCAAGTGCA GGGACATTTT
ACTGATGGTG ATGTGCCTTG GAACTTATTG CCCGATCTTG GTGGTTCAAA TGCGATGCGC
GGATATATCA AAGGGCGTTA TCGTGATGAG CAGATGATGA TGGGACAAGT TGAATATCGC
TTACCCATAT TCCAACGTTA TGGCATGGTC TTTTGGGGTG GGGTTGGTAG CGTTGCATCA
AAAATTAGTG ATCTAAATGA GGAGCTATTA ACCTCTTATG GCACAGGTTT CCGCTTTAAA
ATTAAAGACA ATATCAATTT ACGCCTCGAT ATTGGCGTGG GTGAAAACGA AACCAACTTC
TACCTCAATG TGAATGAAGT ATTCTGA
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| Protein sequence | MKRFLLLTLC AFSNLAVAVE PLIETPENME PTFVDDILSV FGADGEFDQS KAIDMSYLPT
AYYTPEKKFG VGLLMVGLYN TDGASSEEQP SSLVLNSFVS MNNSYGVEVE NMTFFNGGKQ
RLLLGLELHN EAAVYYGQGI EQGDLDGNHH EFEEQLYSFK PRWMTEVADN YFIGVGADFT
YASAEKLELV ETGAPVDSGD ILPNNFSTGV VVTSIYDSRD YRLNATKGWL FQIDAGLYQN
SEYSTFSTYD IELANYIDLS STSLLSSAPG LIAWQVQGHF TDGDVPWNLL PDLGGSNAMR
GYIKGRYRDE QMMMGQVEYR LPIFQRYGMV FWGGVGSVAS KISDLNEELL TSYGTGFRFK
IKDNINLRLD IGVGENETNF YLNVNEVF
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