Gene Ssed_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0582 
Symbol 
ID5609965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp709771 
End bp710268 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID640931427 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001472322 
Protein GI157373722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0137231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAA TCAGGAAGGC GGTTGAGGGT GATGCTCAGG CTATTTATGA CCTCAGGAGT 
CGGGCTATCC TCGAAGAGTG CGCAGGATTC TATAGTGCAG AGCAACTATC ACTATGGACG
AAGGGTGGCG TGTCAGAAAG TTTAATGACC GATATCGTAA ACTCATTTTA TGTTTCAGAG
ATCGATGGGC AAGTAATAGG AAGTGGCAAG CTAACGATTG AAACCGGCAT GCTAGATGCT
ATTTTCGTTG AACCTGAGTT TTTCGGTAGA GGGGCTGCCA GGTTAATGGT TTCCTTTCTT
GAAAACCTGG CTTTAGAGAG TGGTCTTAGT TCAATAAAAC TTGAGTCCAC GCTCAATGCT
GCTCCATTCT ATCGCCGATG CGGATTTGTA GGTGATGAGA TCTCCACTTA CCACTCACCG
AGAGGCATAA GCTTAGATTG TGTTCCAATG CTAAAGTCAC TGGAAAAGAG AGAGCAAGGT
GATGCAAGTC AGCAATGA
 
Protein sequence
MILIRKAVEG DAQAIYDLRS RAILEECAGF YSAEQLSLWT KGGVSESLMT DIVNSFYVSE 
IDGQVIGSGK LTIETGMLDA IFVEPEFFGR GAARLMVSFL ENLALESGLS SIKLESTLNA
APFYRRCGFV GDEISTYHSP RGISLDCVPM LKSLEKREQG DASQQ