| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0558 |
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| Symbol | |
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| ID | 5614081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 678219 |
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| End bp | 679268 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931403 |
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| Product | rod shape-determining protein MreB |
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| Protein accession | YP_001472298 |
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| Protein GI | 157373698 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1077] Actin-like ATPase involved in cell morphogenesis |
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| TIGRFAM ID | [TIGR00904] cell shape determining protein, MreB/Mrl family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000306946 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.447345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA AGCTGCGTGG CATTTTTTCT AACGATCTTT CGATCGATTT GGGTACGGCT
AACACCTTAA TTTACGTTCG CGAAGAGGGG ATCGTACTTA ACGAACCTTC TGTTGTCGCA
ATTCGTGGCG AACGAGGTAG TGGCGGACAG AAGTCCGTGG CGGCTGTAGG TACAGAAGCT
AAGCAGATGT TGGGTCGTAC TCCGGGCAAT ATCCAGGCTA TCCGTCCGAT GAAAGACGGT
GTTATCGCCG ACTTCTACGT GACAGAGAAG ATGCTGCAGC ACTTTATTAA GCAAGTGCAC
AACAACAGCG TGTTCCGTCC AAGCCCCAGA GTACTGGTTT GTGTGCCTGT AGGTGCAACT
CAGGTCGAGC GTCGTGCAAT TCGTGAATCT GCAATGGGCG CCGGCGCTCG TGAGGTTTAC
CTGATTGAAG AGCCAATGGC TGCTGCGATC GGTGCGGGTC TGCCTGTATC TGAGGCGACA
GGTTCTATGG TTGTCGACAT CGGTGGTGGT ACTACCGAAG TGGCAATTAT CTCACTTAAC
GGTGTGGTGT ATTCATCTTC TGTTCGTATC GGTGGTGATA AGTTCGATGA TGCGATCATC
AACTATGTCC GCCGTAACTA CGGCAGCCTG ATCGGTGAAG CGACTGCCGA GCGTATCAAG
CACACTATTG GTACCGCTTA TCCGGGTGAC GAAGTGCTTG AAATTGAAGT GCGCGGCCGT
AACTTAGCCG AAGGTGTCCC TCGTAGCTTT ACACTCAACA GCAACGAGAT CCTCGAAGCG
CTGCAAGAGC CGTTATCGGG TATTGTCAGT GCCGTTATGG TCGCACTCGA GCAATCTCCA
CCGGAGCTGG CGTCAGATAT CTCTGAGCGC GGTATGGTAT TAACCGGTGG TGGCGCATTA
ATTCGCGATC TGGACCGTCT GTTGATGCAA GAGACGGGCA TTCCTGTGAT GGTTGCCGAT
GACCCATTAA CTTGTGTTGC TCGAGGCGGC GGTAAGGCGC TGGAGATGAT CGACATGCAT
GGTGGTGACC TCTTCTCCGA AGAAAGCTAA
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| Protein sequence | MFKKLRGIFS NDLSIDLGTA NTLIYVREEG IVLNEPSVVA IRGERGSGGQ KSVAAVGTEA
KQMLGRTPGN IQAIRPMKDG VIADFYVTEK MLQHFIKQVH NNSVFRPSPR VLVCVPVGAT
QVERRAIRES AMGAGAREVY LIEEPMAAAI GAGLPVSEAT GSMVVDIGGG TTEVAIISLN
GVVYSSSVRI GGDKFDDAII NYVRRNYGSL IGEATAERIK HTIGTAYPGD EVLEIEVRGR
NLAEGVPRSF TLNSNEILEA LQEPLSGIVS AVMVALEQSP PELASDISER GMVLTGGGAL
IRDLDRLLMQ ETGIPVMVAD DPLTCVARGG GKALEMIDMH GGDLFSEES
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