| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0493 |
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| Symbol | |
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| ID | 5613845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 607731 |
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| End bp | 609761 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931338 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001472234 |
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| Protein GI | 157373634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAT GGAAACACAA GGTAGCATTA AGTGTGCTGT TTTGTTTTGG TGCCATTGCC
AATGCGAACG CTGCCGGAAA GTATGACAGC ATACCTCAAA TGGGAAAAAC GGCTAAAGAG
TCGATTGCTA ATTACCAGGG AACAGAGAGG ATCAATGGCG TAAAAACGCT GCAAGATTAT
ATTGTCCAAG AGGAGGAGTT GTTCGACTTC CTTTTCGAAA ATCACCCGAT GTTCAAATAC
CAGGAGTCAG GAAACCTAGT CGGTGATTAC CACATCAGTG ATCGTGGTGA AGAGTATCTC
GATACAGGAC ACAGCCCTTC ATACAGTAAA GGTGTAGGTA AGCCTCGCGC GGTTCAGTAT
CGCTTAGGTG CCAAGTCTAT CTTAGATTAT CCAAACAACT TCGTTGGTCC TGAAAAGTGC
GCCGAATGTC ATGCGACTCA ATATGAGAAG TGGCAACGTT CGCGTCATGC AAAAACAATT
CGTTTCCCAG GTGAGCACCC TGAGGTCGAC AACGACCTAG AGCAAACCAT GTATGGCACT
AAAGATACCT CTATCTTACC AGACGGTGTT ACACCGGATG CTATCTATGC AACCGTTGGT
ACGCCACGTA CCAAGTATGG TTTTATCGAT GCATGGCTGG TACGTGGTAC TTATCATATC
GAAGGCGGTC TACTTAAAGA TGGCACAGGT AAAATGGTTG CCGGTGCTAA CCAGTTCTCT
CGTGGTTGGG CCGAGTGGTT GACGCCTGAA ATGGCAAAGA AAATTAACGA CGTTATTCCA
GCATTTCCAA CGACTATTGA AGCCTTCGGC GCTTCAGGTT CACACCAGAA AGGGATGAGC
TCATACGGTG CAAAGTACCG TGAAGCTATG TTGTTCCAAC CTGCCAGTTC TTATTGTGAA
ATTTGTCATA CCTTTAAGTT TGATTTCCAA AGCAAGCAAG AGTACTTCGA TGCTCTAGGC
GACCCGAAGA AGTTGCAAGA GCATACCATC AGTAAGGGTA TTGCTTGTGA AGAGTGTCAT
GGCGCAGGTG GTCACTTGGA TGGTGGTACC GGTGGTATGC AATCTAACTG TGAACGTTGT
CACCAGCGCT TCCAGTACGA TCCTACTCTT CAAGATACAC CAGAAGCTCA AGAGAAAGGT
GAGTATGCAT TTGGTGTGAA GATGAAGTCA CTATGTCCAT CTTGTGGTAC CGAAGGTTCT
CAGATGTATA ACTCTGAGCA CTATGAGAAG GGTATGCGTT GTACTACCTG TCACGATCCG
CACGAAGTGA CTGACGGTAC TTGGATGTCT GGTATCACTA AGCCAAAGCT TAAGAAAGAC
TGTCAAGACT GTCATGAAGC TCAAACGCTG ATTGCCAGCA ACACAGACAC TCACAGCGAA
CAGACGTGTC AAAGCTGTCA CATGCCAAAC ATGGGTAGCT GCGAAAACTT CAAGGCGATG
CAGTTCCCTG ATCAAGCTGG TTTCGACGCA GTGCGTAAGT CACACATGTG GAAGATTGAC
GTAGACCCAG TGCGTAAGAC AATTAACCCA CCTGAAGGTG AGCCTCGTAC ACAGGGCCCT
GATGGCGGTA AAGGTTGGAC CGTTGCTAAG AACGAAGAGG GTCGTAGCTA CTTAGATCTA
ATGTGGTCTT GTGCACGTAC CGCTATCTCT GACCATGATG TGGTTGAGAA CAAAGGCTGT
CACAGCCAGT TCCAGTCTGA ACTTGAAGTA GGCCTACATT ACGAAGACCA GAAAGAGATC
TACGGTGAAG TAATGAAGAT GCAAACACCT GTTAAAGAGG TTTATGCCAA GGTTGAGCAA
GCGCTTGAGC GTATCGACCA GCTACTCGAA GTCACTAAGC TGTCTGTTGA AGACAAGACT
CAGGTTCTAA TGCTTGCAGA GAAAGCAGAA GAGACTGTCA ATCTGGTTAA GAAAGATGGC
TCTTGGGGTG TTCACGGGTT CCGTTATACC CAGAAGCGTC TCGATGCTGC ACTTACTTAT
GTAACACAAG CGCAAAACAT CTTAGACGGC ACGGGTTACG CGGCTAAATA A
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| Protein sequence | MRRWKHKVAL SVLFCFGAIA NANAAGKYDS IPQMGKTAKE SIANYQGTER INGVKTLQDY
IVQEEELFDF LFENHPMFKY QESGNLVGDY HISDRGEEYL DTGHSPSYSK GVGKPRAVQY
RLGAKSILDY PNNFVGPEKC AECHATQYEK WQRSRHAKTI RFPGEHPEVD NDLEQTMYGT
KDTSILPDGV TPDAIYATVG TPRTKYGFID AWLVRGTYHI EGGLLKDGTG KMVAGANQFS
RGWAEWLTPE MAKKINDVIP AFPTTIEAFG ASGSHQKGMS SYGAKYREAM LFQPASSYCE
ICHTFKFDFQ SKQEYFDALG DPKKLQEHTI SKGIACEECH GAGGHLDGGT GGMQSNCERC
HQRFQYDPTL QDTPEAQEKG EYAFGVKMKS LCPSCGTEGS QMYNSEHYEK GMRCTTCHDP
HEVTDGTWMS GITKPKLKKD CQDCHEAQTL IASNTDTHSE QTCQSCHMPN MGSCENFKAM
QFPDQAGFDA VRKSHMWKID VDPVRKTINP PEGEPRTQGP DGGKGWTVAK NEEGRSYLDL
MWSCARTAIS DHDVVENKGC HSQFQSELEV GLHYEDQKEI YGEVMKMQTP VKEVYAKVEQ
ALERIDQLLE VTKLSVEDKT QVLMLAEKAE ETVNLVKKDG SWGVHGFRYT QKRLDAALTY
VTQAQNILDG TGYAAK
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