| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0468 |
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| Symbol | ubiA |
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| ID | 5612870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 580211 |
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| End bp | 581071 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931313 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001472209 |
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| Protein GI | 157373609 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial
[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAA GGGATAAATT AGACGTTTAC TTGCGTTTAG CCCGTATGGA TCGCCCCATC
GGCACCTTAT TGTTGCTATG GCCATGCTTG ATGGCTTTGC TGCTCGCCGC TGGTGGCATG
CCGGATCTGA AAGTGCTGAC GATATTTATT TTCGGTGTCG TAGTGATGCG GGCGTGTGGC
TGTATTATCA ATGATTATGC CGATCGCGAT CTCGACGCTC ATGTCGATCG CACTAAGTCC
AGACCGCTTG CCAGTGGTGA GGTGACGGGA AGAGAGGCGC TTATTCTCTT CGCTGTGATG
GGACTATTTG CCTTCGGACT GGTTTTGATG CTTAACCCGC TGGTGGTCAA GCTCTCTGTC
GTTGGCATCA TTCTGACCAT TATCTACCCC TTCACTAAAC GCTTTACCAA TATGCCGCAG
ATGTTTCTCG GTGTGGTATG GAGCTGGTCT ATTCCTATGG CCTATGCGGC GCAAACCGGT
GAGGTGCCAG CCGAGGCCTG GTGGTTGTTT GCTGCAAATT GGTGCTGGAC GGTGGCCTAT
GACACCATGT ATGCCATGGT CGATAGAGAG GACGACCTAA AGGTGGGGAT TAAGTCGACG
GCTATATTAT TTGGCAAATA TGACAGGCAG ATCATCGGCT TATTTCAACT GGCGGCGCTG
GCTTGTTTTA TCACTGCAGG CTGGGCGGCG GATCGCGGCT TAGTCTATGG ACTCGGTATC
ATCACCTTCG TAGGATTTAG CATGTACCAA CAAAAGCTTA TTCATGAACG TGAACGGGCC
CCATGCTTTA AAGCTTTCCT CAATAATAAC TGGGCTGGCT TATCGCTGTT TATCGCCCTC
GGTGTCGACT ATCTGATTTG A
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| Protein sequence | MNLRDKLDVY LRLARMDRPI GTLLLLWPCL MALLLAAGGM PDLKVLTIFI FGVVVMRACG
CIINDYADRD LDAHVDRTKS RPLASGEVTG REALILFAVM GLFAFGLVLM LNPLVVKLSV
VGIILTIIYP FTKRFTNMPQ MFLGVVWSWS IPMAYAAQTG EVPAEAWWLF AANWCWTVAY
DTMYAMVDRE DDLKVGIKST AILFGKYDRQ IIGLFQLAAL ACFITAGWAA DRGLVYGLGI
ITFVGFSMYQ QKLIHERERA PCFKAFLNNN WAGLSLFIAL GVDYLI
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