Gene Ssed_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0454 
Symbol 
ID5612187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp567971 
End bp568426 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID640931299 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001472195 
Protein GI157373595 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGA GCGTTCTGAC ATTTAATGAG CTTTCGGTAG ATGAGTTGTA TGAGTTATTA 
AAGCTTAGGG TCGATATTTT TGTGGTTGAG CAAAACTGCC CTTATCCGGA ATTAGATGAA
AAAGACCGCC ATAATGAAAC CCGTCACCTG CTTGGGCGAA ATGATGCGGG AGAGATTGTG
GCTTATGCAC GATTACTCGC ACCAGGAGTC AGTTATGCCG ATGCCAGTAT CGGACGTGTG
GTGGTAGCCG AGCAAGCCAG AGGCGGTGGA GTCGCGCACT CATTGATGAC ACAAGCCATC
GGGCTGACAA AGAGATGCTG GCCCGATCAA AATATTCAAT TAGGCGGACA GGAATACCTT
AAGGCTTTCT ATCAAAAGTT GGGCTTTGAG CCCGTCTCTG AAGTTTATCT GGAAGATGGG
ATCCCGCATC TGGATATGTT ATATCGTCGT TCTTGA
 
Protein sequence
MQWSVLTFNE LSVDELYELL KLRVDIFVVE QNCPYPELDE KDRHNETRHL LGRNDAGEIV 
AYARLLAPGV SYADASIGRV VVAEQARGGG VAHSLMTQAI GLTKRCWPDQ NIQLGGQEYL
KAFYQKLGFE PVSEVYLEDG IPHLDMLYRR S