| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0427 |
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| Symbol | |
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| ID | 5613716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 519719 |
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| End bp | 520624 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931272 |
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| Product | nicotinate-nucleotide diphosphorylase (carboxylating) |
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| Protein accession | YP_001472168 |
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| Protein GI | 157373568 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0665225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000917857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGGAAA ATGACATTCG GTTATCAGTC AAAACCGCAC TCGAAGAAGA CTTAGGTTAT
CAAGATAATG CAGCTGTCTC AGGACGAGAT AAGGCCAACT CAGACATTAC AGCCCAACTG
ATACCGGCCG ATAGATACGC TCAGGCGACA TTGATTACCC GCGAAGAGGG CGTATTTTGC
GGTAAAGCCT GGGCAGAGCA GGTATTCAAT CAACTGGGTG GTGAGGTCGC GCTTCATTGG
CATGTTGACG ATGGTGACCT CCTTGTACCG AATCAACTAT TGTGTGAACT CTCGGGACCA
GCAAGAGCCA TACTCACAGG CGAGCGCACT GCGATGAATT TCATCCAGAC GCTTTCTGGC
GTTGCGACTC ACACCAAGCA TTACATAGAT AAAATTGCCG ACACTCACAC TAAACTGCTC
GATACACGTA AAACCATTCC CGGCCTTCGC ACGGCACAAA AATATGCCGT TACCTGTGGA
GGCGGTAAGA ATCATCGTAT AGGGCTGTTT GACGCTTTTC TCATTAAAGA AAACCACATT
ATGGCCTGTG GCAGTATTTC AAAAGCTATC TCAGCAGCCA GAGCCCTGCA TCCCGATAAG
CCGGTAGAAG TTGAAGTAGA GAGCATTCAA GAGCTTCAAC AGGCACTGGA AGCCAGATCT
GACATCGTCA TGTTAGATAA CTTCGATGTC ACCATGATGC TGGAAGCTGT CGAGCTAAAT
AATCAGTTTT TTGATCAATT AAATGCAGAT AAGACGGCGA GTAAAACCAA GCTGGAAGTC
TCCGGCGACG TGACACTGGA TACCATTGCC AACTACGCTA AAACAGGTGT CGATTACATC
TCTGTTGGAG CCTTGACCAA ACACGTTAGG GCGCTCGATC TATCACTTAG GCTAAAAAAC
ACCTAG
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| Protein sequence | MLENDIRLSV KTALEEDLGY QDNAAVSGRD KANSDITAQL IPADRYAQAT LITREEGVFC
GKAWAEQVFN QLGGEVALHW HVDDGDLLVP NQLLCELSGP ARAILTGERT AMNFIQTLSG
VATHTKHYID KIADTHTKLL DTRKTIPGLR TAQKYAVTCG GGKNHRIGLF DAFLIKENHI
MACGSISKAI SAARALHPDK PVEVEVESIQ ELQQALEARS DIVMLDNFDV TMMLEAVELN
NQFFDQLNAD KTASKTKLEV SGDVTLDTIA NYAKTGVDYI SVGALTKHVR ALDLSLRLKN
T
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