Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0409 |
Symbol | |
ID | 5611429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 478235 |
End bp | 479467 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640931241 |
Product | cell division protein FtsW |
Protein accession | YP_001472150 |
Protein GI | 157373550 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02614] cell division protein FtsW |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00146554 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTAGCG AAGAGAGACA ACTCAACTTA TTTGGCACCA GTGTGAATTG GAGTTGGCCA AATTTGTTTA AAGAGCGAGA AGCTCCCGGC ATGCAATTAT ATGACCGCGC CTTACTTTTT GCTGTTTTGT CTCTGATCTG CTTTGGGTTT GTGATGGTGA TGTCTGCTTC AATGCCTGAA GCACAAAGCC TGACAGGTAA CCCTTATCAT TTTGCTATCA GGCATTTTGC CTACCTTGTG GGTTGCGCAG TTATCGCTGC CGTGGTGTTG CGTATCGAGA TGAGCCGTTG GCAACAGTTC AGCCCGCTAC TGCTATTGAT CGTAGGCATT ATGTTAGTCG CCGTACTGCT TGTGGGGACG TCGGTGAATG GTGCGACCCG CTGGTTATCC GTGGGGCCGA TTCGAATACA GGTGGCTGAA CTGGCTAAGT TTGCCTTTAC CATCTACATG GCGGGGTATT TAGTCAGACG TCATCAGGAG ATACGGGAAA ACGCTAAGGG GTTCTACAAA CCGATTGCCG TATTTGCGGT TTATGCGTTT CTGATCTTGA TGCAACCCGA TTTAGGTACA GTCGTGGTGT TATTTGTGGG AACGGTTGGC TTACTTTTCT TAGCCGGAGC TCGCTTGCTG GACTTTTTTG CCTTGATATT GACTGGAGTG ATGGCATTTG TGGCCTTGGT GCTTTTAGAG CCCTATAGGA TGCGCCGAGT CACCTCTTTT ATGGATCCCT GGCAAGATCC GTTCGGCAGC GGTTATCAGC TAACCCAATC TTTGATGGCT TATGGACGAG GCGATTGGTT CGGACAAGGT TTAGGCAATA GTATTCAGAA ATTAGAGTAC CTGCCCGAAG CCCATACGGA CTTTATCTTT GCCGTTATCG GCGAAGAGTT AGGTTTTATT GGCATCGTTG TGGTGCTGTC GGTGCTGCTT TTTGTGGCCC TTAGAGCGAT AAAATTAGGC AATTTATGTA TTGAGATAGA TAAGCCCTTC GAAGGTTACC TTGCTTATGC CATCGGTATT TGGTTCTGTT TTCAGACAGT AGTGAATGTG GGTGCAAGTA TTGGAATGCT ACCGACGAAG GGGCTCACTC TACCTTTTAT TAGTTATGGA GGCAGTAGTC TCTGGGTTAT GACCGCCGCA GCTATGATAT TGATCCGCAT CGATCATGAG CGACGTTTGA GCTCTATTCA AGCTGTGCAG GGGAAAAAAG TTAATGACAA CCGTGAATAC TGA
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Protein sequence | MRSEERQLNL FGTSVNWSWP NLFKEREAPG MQLYDRALLF AVLSLICFGF VMVMSASMPE AQSLTGNPYH FAIRHFAYLV GCAVIAAVVL RIEMSRWQQF SPLLLLIVGI MLVAVLLVGT SVNGATRWLS VGPIRIQVAE LAKFAFTIYM AGYLVRRHQE IRENAKGFYK PIAVFAVYAF LILMQPDLGT VVVLFVGTVG LLFLAGARLL DFFALILTGV MAFVALVLLE PYRMRRVTSF MDPWQDPFGS GYQLTQSLMA YGRGDWFGQG LGNSIQKLEY LPEAHTDFIF AVIGEELGFI GIVVVLSVLL FVALRAIKLG NLCIEIDKPF EGYLAYAIGI WFCFQTVVNV GASIGMLPTK GLTLPFISYG GSSLWVMTAA AMILIRIDHE RRLSSIQAVQ GKKVNDNREY
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