Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0407 |
Symbol | mraY |
ID | 5612356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 475756 |
End bp | 476838 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640931239 |
Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
Protein accession | YP_001472148 |
Protein GI | 157373548 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000201729 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGTCT ATCTGGCGGA GTATTTAACT CAGTTTTATT CTGGGTTTAA CGTTTTTTCT TATGTAACGT TTAGAGCCAT TCTAGGTCTG TTAACTGCCT TGATATTTAG TCTTTGGTGG GGACCGAAGA TGATTGAACG TCTGCAGATG CTACAGATTG GCCAAGTTGT ACGAAATGAT GGTCCGGAAT CTCATTTCAG TAAGCGTGGC ACGCCGACGA TGGGCGGTAT TCTGATCTTA GCCGGTGTGT TTATTAGTGT GCTGCTTTGG GGAGACCTTG CCAGCCGTTA TGTGTGGGTC GTTTTGTTCG TGCTTGCAAG CTTTGGCTTG ATTGGCTTTA TCGATGATTA CCGTAAAGTG GTTCGAAAAG ATACCAAAGG TTTGATTGCC AAGTGGAAGT ATATCTTACA GTCACTTGCC GCATTGGTCA TCGCATTTTA TCTCTATGCA TCAGCGGATT TAGTCGGAGA AACCCAGCTC GTTGTACCTT TCTTTAAAGA TATTATGCCT CAGCTCGGTG GCTTCTTTAT CGTTTTGGCT TACTTCACCA TAGTGGGGTC GAGTAATGCG GTCAATTTGA CCGACGGGCT TGATGGTTTA GCAATCATGC CTACGGTTAT GGTCGCCGCG GCTTTTGCGT TAATTGCCTA TCTTTCGGGC CATGTTCAGT TTGCAAATTA CCTTCACCTG CCGTATCTGC CTGGTGCCGG AGAGTTGGTG ATTGTCTGTA CCGCAATCGT AGGTGCTGGC CTAGGTTTCC TCTGGTTTAA CACCTACCCT GCACAGGTCT TTATGGGGGA TGTAGGCTCT CTGGCGTTAG GGGCTGCACT CGGTGTGATA GCCGTATTGG TACGTCAGGA GATCCTGCTG GTGATCATGG GGGGCGTCTT CGTTATGGAG ACGGTATCAG TCATTTTGCA GGTTGGTTCA TACAAGTTAC GTGGACAAAG AATTTTCCGT ATGGCACCTA TTCATCATCA TTATGAGTTG AAAGGCTGGC CAGAGCCCAG AGTGATTGTT CGTTTTTGGA TTATCTCTCT GTTTTTAGTT TTACTTGGCC TGGCCACGCT GAAATTAAGG TAG
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Protein sequence | MLVYLAEYLT QFYSGFNVFS YVTFRAILGL LTALIFSLWW GPKMIERLQM LQIGQVVRND GPESHFSKRG TPTMGGILIL AGVFISVLLW GDLASRYVWV VLFVLASFGL IGFIDDYRKV VRKDTKGLIA KWKYILQSLA ALVIAFYLYA SADLVGETQL VVPFFKDIMP QLGGFFIVLA YFTIVGSSNA VNLTDGLDGL AIMPTVMVAA AFALIAYLSG HVQFANYLHL PYLPGAGELV IVCTAIVGAG LGFLWFNTYP AQVFMGDVGS LALGAALGVI AVLVRQEILL VIMGGVFVME TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISLFLV LLGLATLKLR
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