| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0384 |
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| Symbol | |
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| ID | 5612712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 449056 |
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| End bp | 450258 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931216 |
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| Product | phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase |
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| Protein accession | YP_001472125 |
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| Protein GI | 157373525 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
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| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00036859 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000846507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACCAGA GTCTGACAAA TAAACAAATT TTACTAGCTA TAGGTGGCGG TATCGCAGCC
TATAAATCTG CCGATCTGAT TCGTCGCCTC AAAGAGCGTG GTGCAGACGT TCGTGTTGTC
ATGAGTCAAA GCGCTAAAGA ATTTATTACT CCGCTGACAT TACAGGCTCT CTCCGGATAT
CCGGTCGCAT CCGATCTCCT CGACACCGCC GCCGAAGCCG CTATGGGGCA TATTGAGCTG
GCACGCTGGG CGGATCTGGT GCTGGTAGCC CCGGCGACAG CCAATTTAAT TGCACGAATC
AATGCGGGTA TGGCCGATGA ACTCATCACA ACAACCTGCT TAGCCACCGA ATCTCCAGTG
GCCATCTGTC CGGCGATGAA TCAGCAGATG TATCGCAATC AGGCAACACA GGACAATATC
AAGAATTTAT CTGAGCGAGG GCTAACCATC TGGGGCCCGG ATTCGGGTAG CCAAGCCTGT
GGCGAGGTAG GTCCGGGTCG TATGCAAGAG CCTCTGGAAA TTGCCATGCA GGTCGAGCAA
TTTTTTGCGC CTAAGCTTCT TTCTGGTCGC TCACTGCTGC TTACAGCGGG TCCGACACGA
GAAGCGATTG ACCCCGTACG TTATATCTCG AATCACAGCT CCGGGAAAAT GGGCTTTGCC
TTGGCTAAGG CCGCTGCCGA TATGGGAGCC AATGTCACCT TAGTCTCAGG CCCGGTTAAT
CTGCCCACCC CAACAGGCGT GAACAGAGTC GATGTAGAGT CGACCGATGA TATGCTCAAT
GCCGTCATGG CCCAAGTCGA TGCCCATGAC ATTTTTATCG GCTGTGCTGC AGTCGCTGAT
TATCGCGTTG CCGATATCGC CACAGACAAG ATAAAGAAAT CAGCGACTGA GATGCAGCTT
TCATTGGTTA GAAATCCTGA TATCTTAGCC AGCGTTGCGA GTCATACCCC ACGACCGTTT
ACTGTGGGAT TTGCCGCTGA AACTCAAGAT GTTGCACGCT ACGCCAAAGA TAAACTTATC
CGCAAAAAGC TCGACATGAT TGCGGCAAAC GATGTGTCCA GCCCTGAACT CGGTTTCAAT
GCGGATAGCA ATGCACTAAA AGTGATTTGG GAAAAAGGAG AGCAAGATCT CCCCGCAACG
GATAAACTAA CCTTAGCCAC TCAATTGCTC ACCCTGATAG CGAAGCGAAT AGATAACGCA
TGA
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| Protein sequence | MNQSLTNKQI LLAIGGGIAA YKSADLIRRL KERGADVRVV MSQSAKEFIT PLTLQALSGY
PVASDLLDTA AEAAMGHIEL ARWADLVLVA PATANLIARI NAGMADELIT TTCLATESPV
AICPAMNQQM YRNQATQDNI KNLSERGLTI WGPDSGSQAC GEVGPGRMQE PLEIAMQVEQ
FFAPKLLSGR SLLLTAGPTR EAIDPVRYIS NHSSGKMGFA LAKAAADMGA NVTLVSGPVN
LPTPTGVNRV DVESTDDMLN AVMAQVDAHD IFIGCAAVAD YRVADIATDK IKKSATEMQL
SLVRNPDILA SVASHTPRPF TVGFAAETQD VARYAKDKLI RKKLDMIAAN DVSSPELGFN
ADSNALKVIW EKGEQDLPAT DKLTLATQLL TLIAKRIDNA
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