Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0373 |
Symbol | |
ID | 5613033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 438266 |
End bp | 438928 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931205 |
Product | adenylate kinase |
Protein accession | YP_001472114 |
Protein GI | 157373514 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0563] Adenylate kinase and related kinases |
TIGRFAM ID | [TIGR01351] adenylate kinases |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000430661 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGTATTA TGCTATTAGG CGCACCGGGT GTAGGTAAGG GAACCCAGGC GCAGTTCATT ATGGAAAAGT ACGGCATCCC CCAGATCTCG ACAGGTGATA TGTTACGTGC AGCCGTTAAG GCTCAGAGCC CTTTGGGGCT GGAAGCAAAA CTTCTGATGG ATAGTGGTCA ATTGGTTTCT GATAATTTAA TTATTGGCTT AGTTAAGGAG CGGATCGTTC AAGACGATTG TGCTAAAGGT TTCTTATTAG ATGGTTTCCC TCGCACTTTG CCGCAGGCCG ATGCCATGGT GGCAAACGGT ATCGATATCG ATCATGTGGT TGAGATCGAT GTGCCGGATG AGGAGATCGT GAAACGTATG GGGGGGCGTC GTATTCATCC GGGGTCAGGT CGTGTTTACC ATACCGTGTT TAAGCAACCG AAAGTCGAAG GTAAGGATGA CCTGACCGGT GAGGCGCTGA TTATTCGCGC CGATGATGAG GAGAGTACGG TACGAAGTCG TCTGGATATC TATCATCAGC AGACAAAGCC GCTGGTAAAG TATTATGGCA AATTGGCAGA CTTTGGAAAG CTGACCTATA ACAAGTTTGA CGGCACCCAA AGCGTTGCCG ATGTCAGTGC CGCTATAGTT AAAGCTCACC AAGCGTTTGC GCCATCTATC TGA
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Protein sequence | MRIMLLGAPG VGKGTQAQFI MEKYGIPQIS TGDMLRAAVK AQSPLGLEAK LLMDSGQLVS DNLIIGLVKE RIVQDDCAKG FLLDGFPRTL PQADAMVANG IDIDHVVEID VPDEEIVKRM GGRRIHPGSG RVYHTVFKQP KVEGKDDLTG EALIIRADDE ESTVRSRLDI YHQQTKPLVK YYGKLADFGK LTYNKFDGTQ SVADVSAAIV KAHQAFAPSI
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