| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0361 |
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| Symbol | |
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| ID | 5612050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 422949 |
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| End bp | 423809 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931193 |
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| Product | decaheme cytochrome c MtrA |
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| Protein accession | YP_001472102 |
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| Protein GI | 157373502 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.162857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000223849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATCT TACAAAAAAT CGGGCTGTTA ACCGCGTTTA TCGCCGCTAC GGCCCTCTCT
GTGCCAAGTG CACTGGCAAA TAAATCTGCT ACTCCTTTAG AGCAGCAACT GGTAAATAAA
TTCACGGAGG CTAAATACTC TAAGAAAGGT GCTGACACCT GTCTTATGTG CCACAAAAAA
TCTCAATCCG TTATGGCTAT CTTCAATACG CCACACGGAA ATACCAACAA GGGCCCTATG
GCTGGACTTC AATGTGAAAC CTGTCATGGA CCACAAGGAA AACACAAAGG TAAAAACGAA
CCGATGCTCA CCTTCGGTGA TGAGTTATCT GTAGAGGGCC GTAACAGCGT ATGTGAATCT
TGCCACAGCC AAGAGCACAC ACCTTTCCAT GACCAGGCCT GTAGTGATTG CCACAACGTC
CACCAGGCAG AGCTAGCTGC TGAGCAGCCA CAAGCTCAGT GCGCAAGTTG CCACAGCCTG
CAAGACTCCG CTCAGTTTAA GCGTTCGACT CACCTCGACA CCTTAACCTG TAGCGATTGT
CACAACCCAC ATGAAGAGCA GCCACTATCT GTTAATGACA CCTGTTACAG CTGTCATGCC
GAGAAGCGGG GACCAACGCT TTGGGAGCAC TCGCCAGTCA CTGAAGATTG CACCACATGT
CATAACCCAC ATGGCTCAGT TAACGACAAC CTACTTAACA GCCGTGCACC TCAGCTGTGT
CAGAGCTGTC ACAACCAAGC CGGTCACCCA GGTGATGTTC ACAACAGCTT AAATGGCTTC
ACTCAAGGGC AATCTTGCAT GAACTGTCAC AGCAAGATAC ATGGCTCGAA CCACCCTTCA
GGCCACTTGT TTGAGAAATA G
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| Protein sequence | MRILQKIGLL TAFIAATALS VPSALANKSA TPLEQQLVNK FTEAKYSKKG ADTCLMCHKK
SQSVMAIFNT PHGNTNKGPM AGLQCETCHG PQGKHKGKNE PMLTFGDELS VEGRNSVCES
CHSQEHTPFH DQACSDCHNV HQAELAAEQP QAQCASCHSL QDSAQFKRST HLDTLTCSDC
HNPHEEQPLS VNDTCYSCHA EKRGPTLWEH SPVTEDCTTC HNPHGSVNDN LLNSRAPQLC
QSCHNQAGHP GDVHNSLNGF TQGQSCMNCH SKIHGSNHPS GHLFEK
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