| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0327 |
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| Symbol | |
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| ID | 5610067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 378514 |
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| End bp | 379230 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931159 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472068 |
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| Protein GI | 157373468 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00746416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGTTAC TATTTACAAT TTGTTCTTGG GGAGCCTGGT CTCCTCGATG CCAACAGGCC
AGTGATTGGA AGCGTTGGCC GGAAACAAAA TTAGCTCATG ATTCAGATCT GCCCAGAGCA
CCAAAATTAG CCCAGGTTCC GGCCATGCAG CGCAGGCGCT ATAGCGCTCT GACCAAGATG
CAACTCGAAG CCGCCTTTCA ATGTGATGCG CCGCAGCAAT GCCGTACCAT CTTCAGCTCC
AGACACGGAG AGCTAAATCG CACCATAGGG CTACTCGATA ATGTCGTAAA TCGAGAGGCC
CTTTCTCCCA CGGCCTTTAG CCAGTCGGTC CATAATACCG CCAGTGGGAT CTACAGCATA
CTTAAGGGAA ACCGCTCCGC CTCTACCTCG ATTGCCGCAG GTAGTGAGAC ACTTTATCAA
GCACTGGTTG AGGCTTATGC TCAGCTTCAC GAAGACCCCA CTCCACTCCT GTTTGTCTTT
GGTGATGAAC CGGTTCCACA GGTTTATAGC CAGTTCACCG ACGAGCCGGA ACTGCCGCTC
TCTATGGCCT TCGTTTTGAC GCTTACAGCG CCTGAGCCCG GTCAGCCACA GCTCACCATA
GGCAATTTAA CTTCGGCAGA TGATCTGAGT TATGGAGAGC TTCTCCATAG TCTGGCGACA
AAACAGCCCA CGAGTGGAAC GCTATCTAAA CATCATTGGC AGTTAAGTTT TGGATAA
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| Protein sequence | MQLLFTICSW GAWSPRCQQA SDWKRWPETK LAHDSDLPRA PKLAQVPAMQ RRRYSALTKM
QLEAAFQCDA PQQCRTIFSS RHGELNRTIG LLDNVVNREA LSPTAFSQSV HNTASGIYSI
LKGNRSASTS IAAGSETLYQ ALVEAYAQLH EDPTPLLFVF GDEPVPQVYS QFTDEPELPL
SMAFVLTLTA PEPGQPQLTI GNLTSADDLS YGELLHSLAT KQPTSGTLSK HHWQLSFG
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