| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0311 |
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| Symbol | fabG |
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| ID | 5610046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 363567 |
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| End bp | 364292 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931143 |
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| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001472052 |
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| Protein GI | 157373452 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0837369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000385306 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACAAAA GGATATTAAT AACAGGCTCC AGCAGAGGAA TTGGCAAGGC GATAGCATTG
CAACTGGCTG AGGCCGGATA CGATATTGCC CTGCACTTTC ACAGCAACCG CGAAGCGGCA
GAGCTAACGA AACAAGCGCT ACTCGAACAT GGTGTTAACG TCTCCTCTCT CCAGTTTGAT
ATTGCCGATC GTGAAGGGGT CAAAACCAGC ATAGAGAGCG ATATTGAGCA GCACGGTGCC
TATTATGGCG TGGTGCTTAA TGCCGGGATT AATTGCGATA CCGCATTCCC GGCCATGACA
GAGGATGAAT GGGACAGCGT CGTTCACACC AACTTAGATG GTTTCTATAA CGTCATTCAC
CCAACGATTA TGCCGATGAT ACAGACCCGC CTCGGTGGCA GAATTATCAC TATGGCCTCC
GTCTCCGGTA TTGCCGGTAA CCGGGGACAA GTCAACTATA GCGCCTCTAA AGCGGGGATC
ATTGGCGCGA CCAAGGCACT GTCATTGGAG TTGGCGAAAC GAAAAATTAC CGTTAACTGT
ATCGCCCCCG GGCTAATCGA GACCGACATG GTAGCGGATA TCCCTAAAGA TATGGTCAAA
GAGATAGTCC CTATGCGCCG CATGGGCAAA CCCTCTGAAA TTGCCGGCCT GGCTAAATTT
CTGATGTCTG AGGATGCCGC TTACATTACC AGACAGGTGA TCTCGGTTAA CGGAGGTATG
ATCTGA
|
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| Protein sequence | MNKRILITGS SRGIGKAIAL QLAEAGYDIA LHFHSNREAA ELTKQALLEH GVNVSSLQFD
IADREGVKTS IESDIEQHGA YYGVVLNAGI NCDTAFPAMT EDEWDSVVHT NLDGFYNVIH
PTIMPMIQTR LGGRIITMAS VSGIAGNRGQ VNYSASKAGI IGATKALSLE LAKRKITVNC
IAPGLIETDM VADIPKDMVK EIVPMRRMGK PSEIAGLAKF LMSEDAAYIT RQVISVNGGM
I
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