Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0269 |
Symbol | |
ID | 5614221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 303447 |
End bp | 304967 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640931095 |
Product | aldehyde dehydrogenase (NAD(+)) |
Protein accession | YP_001472010 |
Protein GI | 157373410 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00438264 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCTACG CACAACCAGG CACCTCTGAT GCACTCGTCA ATTTTAAAGT CCAATACGCC AACTTTATCG GGGGGGAATG GATAGCGCCT GTCGGTGGCA AGTACTTTGA CAATAGCTCT CCGGTAAACG GGCAGACGTT TTGCCAGATC CCTCGTTCCG ATGAGCGCGA TATCGAACTT GCTCTGGACG CCGCTCATGC CGCCCGGGAG TCTTGGGGAT TAACATCGGT AACCGAGCGC TCTAATCTGC TACTGAGAAT TGCCGATAGA GTCGAGCAAA ACTTGGAGTA CCTTGCTGTC GCAGAGTGTT GGGAAAATGG TAAGGCGGTA CGTGAGACCA TTAATGCCGA TCTGCCCCTG TTCGTAGACC ACTTCAGGTA TTTCGCCGGT TGTATCCGGG CCCAGGAGGG AAGCGCTGCC GATATCGACT CGAATACCGT CAGCTACCAT TTCCCGGAGC CTCTGGGCGT CGTTGGTCAG ATCATTCCAT GGAACTTTCC ACTCTTGATG GCAGCCTGGA AGATTGCACC GGCTCTTGCG GCGGGAAATT GCGTCGTACT CAAACCGGCC GAGCAGACCC CGGTCTCTAT CCTGGTGATG CTGGAACTGA TTCAAGACCT GCTACCACCA GGAATACTGA ATGTGGTCAA TGGCTTTGGC AGCGAAGCCG GACAAGCACT GGCCACCAGC AAACGAATAG CAAAGCTCGC GTTCACAGGC TCGACCGAAA TTGGCCACCA TATTCTAAAG TGCGCAGCTG AGTCATTAAT TCCTTCAACT GTCGAGTTAG GTGGAAAGTC TCCCAACGTT TACTTTGCCG ATGTGATGGA TCATGAAGAC GAATACCTGA GTAAAGCGGT TGAGGGCATG TTGTTAGCCT TCTTTAACCA AGGGGAAGTC TGTACCTGTC CATCCCGGGT GCTTATCCAC GAATCGATCT ACGAGCCGTT TATGGCCAAA GTTATCGAAC GAGCCAAAGC CATCAAGCAG GGCAATCCAT TGGATACCGA TACTCAAGTT GGTGCTCAGG CATCTATGGA GCAATTCGAT AAGATACTCA GCTACCTGCA GATAGGTAAA GACGAGGGCG CTCAGGTGCT ACTCGGTGGG GATATGTGCA AGTTAGAGGG GGACCAGAGT AGCGGATACT ATATCGAGCC CACCATACTA AAAGGCACCA ACGATATGCG TATCTTCCAG GAGGAGATCT TTGGCCCCGT TATCTCGGTC ACCACCTTTA AAGATGAAGC CGAAGCCTTG GCTATCGCCA ATGATACCGA GTACGGCTTA GGTGCAGGTG TTTGGACTCG CGATATGAAC AAGGCGCAGC GCATGGGACG CGGCATTCAA GCCGGACGCG TCTGGATTAA CTGCTATCAC GCCTACCCCG CCCACGCAGC ATTTGGCGGC TATAAAAAGT CAGGGATCGG CCGTGAGACT CATAAGATGA TGTTAGATCA TTACCAGAAT ACCAAGAACC TATTGGTAAG TTACGATGTT AACCCTCTGG GATTTTTCTA A
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Protein sequence | MIYAQPGTSD ALVNFKVQYA NFIGGEWIAP VGGKYFDNSS PVNGQTFCQI PRSDERDIEL ALDAAHAARE SWGLTSVTER SNLLLRIADR VEQNLEYLAV AECWENGKAV RETINADLPL FVDHFRYFAG CIRAQEGSAA DIDSNTVSYH FPEPLGVVGQ IIPWNFPLLM AAWKIAPALA AGNCVVLKPA EQTPVSILVM LELIQDLLPP GILNVVNGFG SEAGQALATS KRIAKLAFTG STEIGHHILK CAAESLIPST VELGGKSPNV YFADVMDHED EYLSKAVEGM LLAFFNQGEV CTCPSRVLIH ESIYEPFMAK VIERAKAIKQ GNPLDTDTQV GAQASMEQFD KILSYLQIGK DEGAQVLLGG DMCKLEGDQS SGYYIEPTIL KGTNDMRIFQ EEIFGPVISV TTFKDEAEAL AIANDTEYGL GAGVWTRDMN KAQRMGRGIQ AGRVWINCYH AYPAHAAFGG YKKSGIGRET HKMMLDHYQN TKNLLVSYDV NPLGFF
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