| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0261 |
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| Symbol | |
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| ID | 5613204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 295106 |
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| End bp | 296437 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931087 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001472002 |
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| Protein GI | 157373402 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000513625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.227904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAA AATTATCGGC GCTGATAATG GCCGCGGGGT TAATGATGAC CTCGCAGGTG
TCTCAGGCGA CGCAAGTAGA AGATATCAAA AGTTTTACAC TTGATAATGG CATGAAAATT
ATGGTCTTGG AAGATGCATC TATTCCAAAT GCCAATATGT ACCTGTTTTG GAAGGTGGGC
TCCAGAAATG AGGTACCTGG TATCACAGGT ATCTCGCATT TCTTCGAGCA TATGATGTTC
AATGGCGCAA AAAAATATGG TCCCAAGATG TTTGACCGCA CCATGGAGGC GGCGGGAGGG
GCTAACAATG CCTATACAAC GGAAAATATC ACGGTTTATA CCGATTGGTT TCCGGCGAAT
GCATTAGAGA CCATATTCGA TCTGGAAGCA GATCGAATCG CCAGTCTCGA TATTAATGAG
AAAATGGTTG AGAGCGAACG AGGTGTCGTC GCATCAGAGC GTACTACAGG TCTTGAAAAC
TCTAATTGGC GAACGCTCCA GGAAGAGATT AAAGGAGCGG CTTTTCGAGC TCATCCCTAT
AGCTGGTCAG TTATCGGGCA TGAATCAGAT ATCGCTGCAT GGACATTGGA TGACTTAGTT
CAATATCACA AAACCTACTA TGCCCCCAAT AATGCCGTGG TTGTGATAGC CGGTGATGTG
AAGCTCGCCG AGGTTAAGGC TCTCGCAGAT AAGTATTTTG CGCCAATTTC CGCACAAGCC
CCTCCAAAAG AGGTGAAGAC GGTGGAGCCG CTACAAAAAG GTGAGCGTCG AGTCTATGTG
CATAAGGCAT CAGTCAGCAC ACCAAATGTG ATGTTGGCTT ATCATGTACC CTCAACATCC
CATGAAGACT ATTACGCACT CGATCTGCTC TCCTCTGTCT TGAGCACGGG TAATAGTTCA
CGCCTCTATC AATCTCTCGT TGAAAAGCAG GTTGCGATAG AGGTCGAAAC TTATCTGCCG
ATGACCTTCG ACCCTAACCT TTTCTATGTC ATGGGTGTCG CTAACCCCGG GATCACGGCA
ACAGAACTTG AAAAGGACCT GATTGCAGAG ATCAACAAGG TTGCCCGTGA AGGGGTGACT
GAGCAGGAGT TGGAAAAGGT AAAAAATATC AAGTTGATGA ATTTCTATCG TTCAATGGAA
ACAATCAACG GTAAAGCTAA TACCGTTGGA ACGTATGAGC TTTATTTCGG GAGTTTTGAG
AAGTTGTTTA ATGCGCCGGA AGCTTATGGA AAAGTGACGC CTGCCGATCT GCAACGTGTC
GCACAAACTT ACCTGCGTCG TGCAAATCGA ACCGTTGCCG TATTGGCCGC CATAGAGGAG
ACAGATGAAT GA
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| Protein sequence | MIRKLSALIM AAGLMMTSQV SQATQVEDIK SFTLDNGMKI MVLEDASIPN ANMYLFWKVG
SRNEVPGITG ISHFFEHMMF NGAKKYGPKM FDRTMEAAGG ANNAYTTENI TVYTDWFPAN
ALETIFDLEA DRIASLDINE KMVESERGVV ASERTTGLEN SNWRTLQEEI KGAAFRAHPY
SWSVIGHESD IAAWTLDDLV QYHKTYYAPN NAVVVIAGDV KLAEVKALAD KYFAPISAQA
PPKEVKTVEP LQKGERRVYV HKASVSTPNV MLAYHVPSTS HEDYYALDLL SSVLSTGNSS
RLYQSLVEKQ VAIEVETYLP MTFDPNLFYV MGVANPGITA TELEKDLIAE INKVAREGVT
EQELEKVKNI KLMNFYRSME TINGKANTVG TYELYFGSFE KLFNAPEAYG KVTPADLQRV
AQTYLRRANR TVAVLAAIEE TDE
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