Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0235 |
Symbol | |
ID | 5614067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 269907 |
End bp | 270542 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640931061 |
Product | disulfide bond formation protein |
Protein accession | YP_001471976 |
Protein GI | 157373376 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTA TTTCACAAGG TTGGCAGGAC CTTAAAACTG CACCAGTTAG CACACTACAG CAATGGCAAG AGCAACGTTG GATATGGCTC CTGATGAGTG GCGCAGCCGC ATTTCTAATC GGCTCGGCGA TGGGATATTT CCAGTGGTTC CTGGAGATGG ACCCATGTGA GATATGTGTC TACATTCGAT TCAGCCAGTT CTGCATCCTC TTTGCTGGTC TGGTCATAGC CATAAACCCT AATCAAGTAT TACTTAAAGT CCTGGGCCTG ACACTGGCCT GGTATGGCGT CGTGCAAGGC ATGATGTGGT CGATTGACCT GTCTATGCTG CACGATGCAT CACATGCGAT GGATGATGTG ATGGCGGGTG GTGGAGACCT CTTTGCCGCA GGCGGCGGTG GAGGTGCTTG CTCTACAGAA CCAACATTCC CACTGGGCTT ACCTCTGCAT GAGTGGTTCC CCTATGAATT TCAACCATCG GGTATCTGCG GTGAAGATGA TTGGAGTTTA TTGGGACTCA ATATGGCGCA GTATTGCATC ATCGCCTACT CGGTCTTTGG TATCGCACTC AGCGCCGTGA CGTTTGGCTG GATCTCCAGG CTCACTCAAG GGCATTCGAG CGTTAAGGCT CACTAA
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Protein sequence | MNAISQGWQD LKTAPVSTLQ QWQEQRWIWL LMSGAAAFLI GSAMGYFQWF LEMDPCEICV YIRFSQFCIL FAGLVIAINP NQVLLKVLGL TLAWYGVVQG MMWSIDLSML HDASHAMDDV MAGGGDLFAA GGGGGACSTE PTFPLGLPLH EWFPYEFQPS GICGEDDWSL LGLNMAQYCI IAYSVFGIAL SAVTFGWISR LTQGHSSVKA H
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