| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0233 |
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| Symbol | |
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| ID | 5613634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 268291 |
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| End bp | 269031 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640931059 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471974 |
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| Protein GI | 157373374 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAACA GAACCAGTTT AAAAAGACAA CGAATTTCAG CGATATTAGA TTCAGCCGAA
AAAGCCATAG TAGAAAATGG ACTTTTCTCC CTGAGCCTAC TGGAACTCGC CAGGCAGTCA
GGTTGCTCGG TGAACACCCT CTATAATTAT TTTTCCAATA GGGAAGATAT TGCCGTGAGT
CTGTTTAACC GCTATATCGG AAAGTGGGGA GTTCAGGCCA GTCGGGAGAT AAGTCAGCAT
AGATATAGTT TCGCCGAGCG CTTTCTCGCG ATGCAGATGA TCTGGGTATA TCGTCAACAT
CGGGATATTG ATGAAGGTGG AGTACAGTTC CTGGCCGCAA TCCCCTGCGT ATGGAAGCAC
GCATCCCATC AGAGGATCTC GACAACCAGA CAGCTCTTGG ATACCTGGTT TACTCTAAAC
AGAGAGTTCT TAATGATGGC AAGGGAACAG GGGGAGATGA CGGCATCAGA TGCTCAGATT
GATGAATGCT TACTTATGGT ATCAATCACC GAAAGAGGCT TTTCTTTATT AGCTAATAAT
TATCTATTCC GTGAAAACAT AATAAACATG CCACTTAGCA AAATATTTGA TTCGATGAAT
GAAGAGTTAA AACAGTTAGA GTGGAAAACA GCAATTAGTG ATAGTAGTTT TAATCGTGTA
TTAGAGTTAG TCACACATGT AAATGAACAG CTATCCGATC ACCATATTGA CAACCTTATA
TATGATATCG AAGATAAATA A
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| Protein sequence | MANRTSLKRQ RISAILDSAE KAIVENGLFS LSLLELARQS GCSVNTLYNY FSNREDIAVS
LFNRYIGKWG VQASREISQH RYSFAERFLA MQMIWVYRQH RDIDEGGVQF LAAIPCVWKH
ASHQRISTTR QLLDTWFTLN REFLMMAREQ GEMTASDAQI DECLLMVSIT ERGFSLLANN
YLFRENIINM PLSKIFDSMN EELKQLEWKT AISDSSFNRV LELVTHVNEQ LSDHHIDNLI
YDIEDK
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