Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0221 |
Symbol | |
ID | 5613862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 252433 |
End bp | 253398 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931047 |
Product | hypothetical protein |
Protein accession | YP_001471962 |
Protein GI | 157373362 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2177] Cell division protein |
TIGRFAM ID | [TIGR00439] putative protein insertion permease FtsX |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.114522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA AACCTCAGTT AACCAGAAGC AAATTGCCTA TTTCGGGTCG TATTGTGATG TTCTTTATTC GTCATATCCA ACACGCTATG GGCAGTATGG GTGAGTTGTG GCGTAACCCG GTATCCTCTC TTATGACCAT GGCCGTGCTT GGGGTTAGCT TGAGCCTACC TGCAGCGCTG CAGGTACTGG TTAAGAATGC AGAGACCATC ACCCAATCAT GGAATAGCGC GGCTGAAATT TCACTTTTTG TTGATGAAGG ACGAAGTGAA AGAACGATTC AGAGCTTGAT CACTCGCATT AAAGTTTACC CTGAAGTGAG CGAGGTTAAC TATATTAACC GGGCTCAGGC CCTCGAAGAG TTTCAACGCT TATCCGGGTT TGGCGAAGCT CTTTCCTATT TAGATACTAA TCCGCTCCCT GCGGTCGTCA CAGTGACTCC AAGCCTTAAA TATTCAAGCC CGGTCGGGGC GCGCGAATTA CTTAAGAAAC TGGAAATGGA ACCCGAAGTC AGTTTTGGTC GACTCGATAT CGAGTGGTTG GAGCGACTTC AGGCGGTCGT GAGGCTACTG GAGCGAACGG TACTCGCCAT TGCGGCACTC TTAGTGTTAG CGGTGGTACT GGTGATAGGC AATACGATTC GCTTAGCTAT CATGAATCGC CGCACCGAGA TCGAGGTGAT GAAACTCGTC GGTGCGACCG AAGCCTTTAT TCAGAGACCC TTCCTCTATA CCGGGATCTG GTATGGAATA ATAGGTGGTG TTCTGGCATG GATAATCATT AACCTGTTAG TCTGGTATCT CGATAGCGCA TTGGCCGAAT TGCTGGGCTT GTATGGGAGT CAGTTAGAGA TGCAGTCTTT GACTCTCGTA GAGCTTGGTC AGTTAGTCGG CCTGGCCTCA TTTCTAGGTT GGCTGGGATC TTACCTCTCG GTACGTCAAC ACCTCAGGGC GATAGAGCCT TCATGA
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Protein sequence | MSNKPQLTRS KLPISGRIVM FFIRHIQHAM GSMGELWRNP VSSLMTMAVL GVSLSLPAAL QVLVKNAETI TQSWNSAAEI SLFVDEGRSE RTIQSLITRI KVYPEVSEVN YINRAQALEE FQRLSGFGEA LSYLDTNPLP AVVTVTPSLK YSSPVGAREL LKKLEMEPEV SFGRLDIEWL ERLQAVVRLL ERTVLAIAAL LVLAVVLVIG NTIRLAIMNR RTEIEVMKLV GATEAFIQRP FLYTGIWYGI IGGVLAWIII NLLVWYLDSA LAELLGLYGS QLEMQSLTLV ELGQLVGLAS FLGWLGSYLS VRQHLRAIEP S
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