Gene Ssed_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0220 
Symbol 
ID5613305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp251738 
End bp252430 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID640931046 
Productcell division ATP-binding protein FtsE 
Protein accessionYP_001471961 
Protein GI157373361 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID[TIGR00960] Type II (General) Secretory Pathway (IISP) Family protein
[TIGR02673] cell division ATP-binding protein FtsE 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.123928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAT TTGAGCAGGT AAGTAAGGTT TATCCTGGTG GGCAGAAAGC CTTGTCAGAT 
GTTAACTTTC ACCTAAAGCG CGGCGAGATG GCCTTTTTAA CGGGTCACTC CGGCGCAGGT
AAAAGTACAT TGCTTAAATT AATCACAGTG ATCGAACGCG CTAATGCCGG GCGTGTGTTA
ATTAACGGAC ATGATATTGC AAAGCTTTCA CGCTCGGATG TTCCATTTTT AAGGCGTGAC
ATTGGGATGA TTTTCCAGAG TCATCATCTG TTGATGGAAA AGAGTGTTTT CGATAATGTC
GCCCTGCCTT TGGTGATCGA AGGTTTTTCC CATGGTGAGA TAAAAAAAAG GGTCTTGGCC
GCATTGGATA TGGTGGGACT CTATGGCAAA GAGCGCCATA GTCCCATCAT GTTGTCTGGT
GGTGAACAGC AGCGTGTGGG CATTGCACGT GCAATCGTTA ATAAGCCGCC GTTATTGTTG
GCCGATGAAC CTACGGGTAA CTTAGATCCT AAGTTGTCTA TGGATATCCT ACGGTTATTT
GAAACCTTTA ATGACTCAGG CACCACAGTA CTGATTGCGA CCCATGATTT GGGACTTATC
GCACGCATGA AATATCGTAC ACTGACTTTG AAACAGGGAC ATGTGCTGGG TGGCGAAGAG
CTGATGTCTT CGGCTGATGG GGTAAAGGGA TAA
 
Protein sequence
MIRFEQVSKV YPGGQKALSD VNFHLKRGEM AFLTGHSGAG KSTLLKLITV IERANAGRVL 
INGHDIAKLS RSDVPFLRRD IGMIFQSHHL LMEKSVFDNV ALPLVIEGFS HGEIKKRVLA
ALDMVGLYGK ERHSPIMLSG GEQQRVGIAR AIVNKPPLLL ADEPTGNLDP KLSMDILRLF
ETFNDSGTTV LIATHDLGLI ARMKYRTLTL KQGHVLGGEE LMSSADGVKG