| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0147 |
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| Symbol | |
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| ID | 5610997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 166663 |
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| End bp | 167193 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930973 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471888 |
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| Protein GI | 157373288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.621737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTCT ATTTCAGACT GTTTTGGCTA TTCATCTGGC GAGTTCGCCA CTGTAACTCT
ATCGATTTTC TTGGTACCAG CCGTATTAGT TATCGTGCAC TGCCTCTGGA CTGTGATATT
AACTGCCATG TAACTAATTC TCGTTATCCG GCACTTATGG ACTTGGCTCG TACATATATG
TTGGCCGAGA TGGGACTCCT TAAGCGTTTC ATTAAGCTGA AGTGGTTGCC TATCGTCAAT
GCGGCAGAGT TTACCTATAT TCGGGATATC AAGCCCCTTA CTAAGTTTGA GATCGAATCC
AAGCTGGTTG GCTGGGATGA CAAGTACTTC TATATTGAAC AGCGCTTTGT CAGTGACAAT
ATCCTGCATT GTATCGTACA CGTGCGAGGC GTCTTTGTTT GTAAGGGTAA GCAGGTGCCG
ATAGATACTA TGGTGAAAGA GGTTAACTTC GAGGGGCCCA GACCCGAGTT GCCACCGGAA
GTGGTTAAAT GGAAAGCCTT TCTGCAACTA AAGAAAGAGC GCAATATTTA G
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| Protein sequence | MNLYFRLFWL FIWRVRHCNS IDFLGTSRIS YRALPLDCDI NCHVTNSRYP ALMDLARTYM
LAEMGLLKRF IKLKWLPIVN AAEFTYIRDI KPLTKFEIES KLVGWDDKYF YIEQRFVSDN
ILHCIVHVRG VFVCKGKQVP IDTMVKEVNF EGPRPELPPE VVKWKAFLQL KKERNI
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