Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0110 |
Symbol | |
ID | 5612857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 123931 |
End bp | 124686 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640930936 |
Product | glycosyl transferase family protein |
Protein accession | YP_001471851 |
Protein GI | 157373251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAATA GAAGCGTAGC TTTGGTACTA ACCAGCTGTA ATAGGTTTGA TTTGCTCGAA AAAACATTGG TGAGCTTTTT CAAGTTCAAT ACCTACCCTA TTGCCCAACA TATCATTATT GAAGATAGTC ATAACCTGGA CAAATTGAAT AAGGTATTGG TTAAGTTTCC TGGTGTTGAT TTTACCGTTT TAAATAATGA ACCCCAGTTA GGGCAGATGA AAAGCATCGA CAGGGCCTAT AGTAAGGTAA CTTCTGAGTA TATCTTCCAT TGTGAAGATG ATTGGGAGTT CTACCGTGAA GGCTTTATTG AGGATTCGTT TAAAGTGCTC GATAGTGACG ACAAGGTTGT GACCATTTGG CTTAGAGAGC AAAATGATAC CAATGAGCAC TCAGTCGAAC CCGAAGTCTT TAAGTGCAAA GATCCTAGTG GCCGTGATTA CCAAATCATG ATGCGAAATT ATAGAAGAAA GGCTGATTCA GACGTTTGGC ACGGATTTAC TTTTAATCCT GGTTTGAGAA GGCTCAAAGA TTATCAGCTA GTTGCGCCCA TTGGTGAGCT TGGCCGAGAG TGGAATATGA GTGAGCTATA CCATGGAAAA GGATTTAAAG GGGCTATCTT TGAAACTGGT TATGTTCGCC ACATCGGTGA TCACAGAGGA ATACGTTATA AGATCGGTGA GAGCCAATTT GCCAAAGATG TCTCTGTAGG ATGCAAGCGA ATTAAAGCGG GAATTTGTAA GCTGTTTGGC GTGTAA
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Protein sequence | MENRSVALVL TSCNRFDLLE KTLVSFFKFN TYPIAQHIII EDSHNLDKLN KVLVKFPGVD FTVLNNEPQL GQMKSIDRAY SKVTSEYIFH CEDDWEFYRE GFIEDSFKVL DSDDKVVTIW LREQNDTNEH SVEPEVFKCK DPSGRDYQIM MRNYRRKADS DVWHGFTFNP GLRRLKDYQL VAPIGELGRE WNMSELYHGK GFKGAIFETG YVRHIGDHRG IRYKIGESQF AKDVSVGCKR IKAGICKLFG V
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