| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0091 |
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| Symbol | |
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| ID | 5613307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 101794 |
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| End bp | 102273 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930917 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471832 |
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| Protein GI | 157373232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.156914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000348756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACGACAG CGCTTCTCAT CTTAGGTTTC ATCATCGTTA TGACCTTAGC CGCTTATGCC
ACGGCATTAT TACTCAAGCT TCGTAAACAA ACCGCACAGC GGTTAAAGCG ACAGCAGGAG
CTGGACGAAA TAAACAGAGC CAGAGTCGAT GAGCACTTAG ATAGCATACG CTATATTGCT
ACGGCCATGT TAGAGGAGAG GTGTGAGCTA TCTGAAGGCG TAATGAGAAT AGCAAAGTTA
TTTGGCATAC TCTCGATGTC TGAACAGGTT GCGCCACAGT TTCCAGCAAT TTTTAAGCAC
TTCGAAATAA TCGAAGAACA CCCCATCATG GCCGAAAGAA AGCAGCTTGA GAAGAAGCAG
CGAATGAAGT TAGATTTCGC TCGTATGCGT TCGGAAGCAG AGCTTGAAAC CGCCATTCTT
GAGGAAGCTA AACAGTTGGT GACATACAGC CAAACAGAGA TCCCGACACA TTTACATTAG
|
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| Protein sequence | MTTALLILGF IIVMTLAAYA TALLLKLRKQ TAQRLKRQQE LDEINRARVD EHLDSIRYIA
TAMLEERCEL SEGVMRIAKL FGILSMSEQV APQFPAIFKH FEIIEEHPIM AERKQLEKKQ
RMKLDFARMR SEAELETAIL EEAKQLVTYS QTEIPTHLH
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