Gene Ssed_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0069 
SymbolflgB 
ID5610629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp79521 
End bp79871 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID640930895 
Productflagellar basal body rod protein FlgB 
Protein accessionYP_001471810 
Protein GI157373210 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA ACCTCGATGC CGCACTGGGT ATTCATCCCC AAACGCTCGA TTTTAGAGTC 
GAACGAACCA AGATACTAGC AGGCAATCTG GCAAATGCCG AGACCCCTGG TTATAAAGCT
AAAGATCTTA ATTTTCAAGC ACTCATGTCA GGTATTAACG CCGGTATGCC CGCCAGCAAT
CAATATGAAG TGGGTTACCG GGTGCCGTAT CAGACCTCTG CCGACCAAAA CACGGTCGAA
CTAGGCAAGG AGCAGGCAAG GTACTCACAA AATGCGATGG ATTACCAAAC CAGCCTGACC
TTTCTCAACA TGAAGATTTC GGGACTCAAG TCAGCCATCG AAGGGCAATA G
 
Protein sequence
MAINLDAALG IHPQTLDFRV ERTKILAGNL ANAETPGYKA KDLNFQALMS GINAGMPASN 
QYEVGYRVPY QTSADQNTVE LGKEQARYSQ NAMDYQTSLT FLNMKISGLK SAIEGQ