Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0058 |
Symbol | |
ID | 5610968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 69675 |
End bp | 70700 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640930884 |
Product | hypothetical protein |
Protein accession | YP_001471799 |
Protein GI | 157373199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAATG GAATTTCCGA TAGCTTAAAT GTCCAGCAAC GTAGTCAACC CCTCGTTGCT GCAACAAACG ACAGGCATCA AAGTAAGGCA CCAAAGCCTG CTCAACTCAC AGCCATTCCC TCCCATAGGC TGGAGACCTA CGCGCGCTGG GCAAGAGTCA CCCAAGGACA GCATAAAATT TCGGCTTTCC AGGTGGCGGA GCAAGGCCTT AAACAGATTT TTCATCTGTT AAAACAGCTC AAGCGGCTAG CGCAGAGCGC GATCAGTTTA AGCGGTGAGA GTCGTAATGC TCAAATTAAG GCGGCAACGT CATTACAACA ACGCCTCTCA CAACTTAGAG TTGAATATCA AAACAGGCCG CTGCTGGATC ACCAGTTAAA TCTCATCTCG AAGAAACGTC CTCCGGCTCC CCGTCAGTTT ATACTGAAGT CGATTGAGCT GGCTCAACCT AAGCCAAGAG ACGAGCGTAT ACAGATCCAA TCAGACAAGG ACTCTATCTC TATTTTTCTT CCGGCAAACG CCTCCAAAGC GGCCCTTACC GGTCACCTAT CCGAAGCCAT GCATAATCTT GAGATCACGA TTCCCGCTCC TCACTCTGAG ACGACTGTGT TCAATTGTAA TGATGAACGT TGGCAGAAGA TAAAAGCCGG CATTATGATG ACTGGTAAGG GCCAGAGGCT GCCAGCCGGA GAAGCCAGAA CCATAAAAGT TGATGAAATA CTCAGCTGGC AGGATCCAAG AGAGTGGCGC TTAGGTAGTA ACGAAGATCT CAAGCAAACG GTGGTTAAAA TCCATAAGTC TCTGTTTAAA TTGGAACAGC AATTGCGAGA ATTAACACAA ACAGCGGATA AAATTCAACG TCAACTTCAT AAGGCCAACA AAGAAAACGA CTTTGATGAT GAGCTAAAAA AAACACTCAA CAGCCTCGAA CGCTTAATGC AGGCGACCCC TTTCACATTG CAGATGACTT CGGTGATGGC TCAGGCTAAT GTCACCCGCT CTCAGGTCTC TTCACTACTG CTCTGA
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Protein sequence | MVNGISDSLN VQQRSQPLVA ATNDRHQSKA PKPAQLTAIP SHRLETYARW ARVTQGQHKI SAFQVAEQGL KQIFHLLKQL KRLAQSAISL SGESRNAQIK AATSLQQRLS QLRVEYQNRP LLDHQLNLIS KKRPPAPRQF ILKSIELAQP KPRDERIQIQ SDKDSISIFL PANASKAALT GHLSEAMHNL EITIPAPHSE TTVFNCNDER WQKIKAGIMM TGKGQRLPAG EARTIKVDEI LSWQDPREWR LGSNEDLKQT VVKIHKSLFK LEQQLRELTQ TADKIQRQLH KANKENDFDD ELKKTLNSLE RLMQATPFTL QMTSVMAQAN VTRSQVSSLL L
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