| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0053 |
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| Symbol | |
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| ID | 5610312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 64688 |
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| End bp | 65839 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640930879 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471794 |
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| Protein GI | 157373194 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCTA ATGTAATCGA CTTAAGCTCG GGCATAGGTG GAACAAAAGA CTCTTTGACA
GGGACTAAGA TCGCCAATTC GCAACAGGAA GAGCCAGGAA CACAAGCCAG CTACTCAGCG
TGTTCCGCCT CAAGCATCGC TGAACGGATA CCTGAGCAAG AAGCGGCGAT CGTATCTGAC
TTACCCCCGG TTGGGACATT GAACCTATTA ATCTCACCCG CACAAACCCA GGTGTCAACG
ACCCAATCCG GTCAGACGTC ACCCGGTCAA TTCATGATAT CCGGTGAATA CCAGGCCTCA
CTCAACCCGT CAGGTGTTGA GACGCTTAAT CGATTCTTAC ATTTAAGTAA TGATCAGAAT
CAGACTGCGC CTCCCTTCGT CACATCGCCC CCCCTCCAGG GCGGAACTTA CTCTGCTTCA
GATGCAAGCA AAACGAGCGC TCATAACACA GCGCAAGTAT CACAACTGCA GACACTGACA
GGCAAAGCGA ATGAAACACC GCTTTCACTG AATCAGACCC AAACATCTTC TCTGCCACTA
CCTGAGCAGC CGGGAGGTAA ACATCCATTT TCCTCACAAT TTAGTGCGAG CCTTTCCGGG
GAAAGGAATG CCAACCTACA CTTGCCATTA ACCCTGGCAG AGTCTCGTCT ATCCGATGTT
AATGAGGCCG CTGTTCAGGT ATTAGCCGGC GGCCATAGAA CTCAGGCCCC CGTGAGTCAA
TGGGGTCCGG TACCCGTCAC TTCAGCAGCA CCATTAGCTC ACCAGGCCCA AGAGATGCTT
TCGCCATTAC GGGAGCAGAT CCGATTTCAG GTAGACCAAC AGATAAAACA AGCGGAGCTG
AGACTGGATC CTCCCGAACT CGGCAAAGTT GAGCTGAGTA TTCGATTGGA TGGAGACCGA
CTCCACATTC AGATGCATGC CGCAAACGCC TCCGTTAGAG ACTCGCTTTT AATTGGGTTA
GAGCGCTTAC GTGCCGAACT CGCTATGGAT CACGGCGGGC AGATAGATGT CGACATTAAT
CAGGGCAAAC AGGAGCAGAG AGAGTCCTCT CCCGAAGCCT CCTCAATCTC ACTGGCACGT
GGCGATGAAC CAGATAATCA CAGTACAAAA CATGACAGTC AACAGAGTAA TCAAATCGAT
CTGTTAGCCT AA
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| Protein sequence | MISNVIDLSS GIGGTKDSLT GTKIANSQQE EPGTQASYSA CSASSIAERI PEQEAAIVSD
LPPVGTLNLL ISPAQTQVST TQSGQTSPGQ FMISGEYQAS LNPSGVETLN RFLHLSNDQN
QTAPPFVTSP PLQGGTYSAS DASKTSAHNT AQVSQLQTLT GKANETPLSL NQTQTSSLPL
PEQPGGKHPF SSQFSASLSG ERNANLHLPL TLAESRLSDV NEAAVQVLAG GHRTQAPVSQ
WGPVPVTSAA PLAHQAQEML SPLREQIRFQ VDQQIKQAEL RLDPPELGKV ELSIRLDGDR
LHIQMHAANA SVRDSLLIGL ERLRAELAMD HGGQIDVDIN QGKQEQRESS PEASSISLAR
GDEPDNHSTK HDSQQSNQID LLA
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