| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9326 |
|---|
| Symbol | |
|---|
| ID | 8672677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10276446 |
|---|
| End bp | 10277804 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003344687 |
|---|
| Protein GI | 271970491 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.607046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGTC AGGGAACCAT CGGTGACCGC GTCCGCGGAC TGCGGCTGAG TAGGCGCATG
TCTCAGGCCC AGCTAGCAGG GCCTGACCTC TCCGACAGTT ATGTCTCCCT CATCGAGTCC
GGCAAGCGCA CGCCGACTCC GGTGGTCGCG CGCCTTCTCG CCGAACGGCT GGGGTGCACC
ACCGAGTTCC TGCTGCACGG GATCGAGCCG CGCCAGCGGA TCGACACCGA GCTGGGCCTG
CGCCACGCGG AGCTGGAGCT GCAGCACGGC GACCCGTCCG CCGCCGCCGA GCGGTTCGGC
GAGATCGTCA AGGTCGCCGG CGAGGAGAAC GCCATGCTGG CCGCGCACGC GCGGTTCGGC
CGAGCCCGCG CCCTGGAGTC CCAGGGCAGG ATCGGCCCGG CGGTGGAGGC GTTCGAACGG
CTCCGGCGCG AGGCGGCCGC CCACCCCGAA CGGCTGGCCG ACCTGCCGCT GACGGTGGCG
CTGAGCCGCT GCTACCAGCG CGCCGGCGAC GCGCTGCGCG CCCATGACCT GGCCACGCAC
GCCCTCACCC AGGTGAACCG GCTGGCCCTG GCCCAGGGTG AGATCGCCGT GGATCTGGCC
GCCTCCCTGA TGGAGACCGA GATCTCCCGC GGGCCGCACT CCCCGGGCCT GTCCTACGTC
CGGCACCTCC TGTCGGTCAA CGGCGTTCCG GCCGCGGTCA ACCGCACCGC CGAGATCCAC
TCCCTCTGGC AGGCCAGCAT CACCGCGGCC GAGGGCGAGG ACTCGGCGCT GGCCGTCCGC
CTCGCCGACG ACGCGATCGC GACCGGACGT CCGACGCGGA TGGCCTTCCG GCTGGCCCGC
ATCGCGATGG ACTGGTCGCG CTTCACCGCC TCCCAGGGCG AGGACTCGCT TGAGGAGGCC
CACCAGCTCG CGACCGCCGC GAGCGAGGTC TTCGGCGCGT TCCCCGACAG GGTGAACGAC
CACGCCAAGA GCCTGGTGGT GCTCGCCTAC GTCCAGCTCA GAAGCGGCGA TCCGGACGGC
GCGGCCGACC TGGCCGGGTC CGCCCTCGAC GCGCTGAGCG GCCGGATCGG CGCCACGGCG
GCCACCGCAC ACCTGGTGCT CGCCCAGGTC GCGCTCACCC GCGGCGAAGG CGATGTCACG
ACCATCCTGC ACAGCGCCCG CGGGCTGCTC GACGACCTGC GGTCCGGGGC CTCCAGCCCC
GACCGGGAGA TCGCACGGGT CTGGCGCGAG CTCGGCGACC TGTACAGCCG GGTCGGTGCC
GGCGAGGAGC AGGCGAGCGC ATACCGTAAG GCGCTTGAAG CCGCCGGAGT GCGTAGTGCG
ATGGTTGGTG TGACGGTCGA TTCGGCGCTG GTTCGGTAA
|
|---|
| Protein sequence | MPSQGTIGDR VRGLRLSRRM SQAQLAGPDL SDSYVSLIES GKRTPTPVVA RLLAERLGCT
TEFLLHGIEP RQRIDTELGL RHAELELQHG DPSAAAERFG EIVKVAGEEN AMLAAHARFG
RARALESQGR IGPAVEAFER LRREAAAHPE RLADLPLTVA LSRCYQRAGD ALRAHDLATH
ALTQVNRLAL AQGEIAVDLA ASLMETEISR GPHSPGLSYV RHLLSVNGVP AAVNRTAEIH
SLWQASITAA EGEDSALAVR LADDAIATGR PTRMAFRLAR IAMDWSRFTA SQGEDSLEEA
HQLATAASEV FGAFPDRVND HAKSLVVLAY VQLRSGDPDG AADLAGSALD ALSGRIGATA
ATAHLVLAQV ALTRGEGDVT TILHSARGLL DDLRSGASSP DREIARVWRE LGDLYSRVGA
GEEQASAYRK ALEAAGVRSA MVGVTVDSAL VR
|
|---|
| |