Gene Sros_9216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9216 
Symbol 
ID8672563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10163100 
End bp10163654 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003344577 
Protein GI271970381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGT CGGGGACCAC CCCAGATCCC GAAATCGAGA TGCTCTCCCA TGGAGAGCCC 
CTGGCCAGGG ACCGCGTCGA CGTCGCGGCG TTGTTCGCCG ACCACCACCT CGGGCTGGTG
CGGCTGGCGC TGCTCATGGT GGGGGACCAG GCCACGGCCG AGGATGTGGT GCAGGAGGCG
TTCACCCGCA CGCACGCGGG ACGGCACCGC CTGCGCGATC CCCGGCGCGC GCTGACCTAC
ATCCGCTCGG CGGTGCTCAA CGGCTCCCGT TCCGTGCTGC GGCGCCGGGC GGTGGCGTTC
CGGCGGGCCG TGCCGTACGA GCCGCCCGTC TGGTCCGCCG AACACGCCGC ACTGCTCGGC
GAGGAGCGCC GCGAGGTACT GGTGGCCCTG CGCGCGCTAC CGGGGCGGCA GCGCGAGGCG
CTGACGCTCC GCTACTACCT CGACCTGTCC GACCTGGAGA TCGCCGAGAC CATGGGGATC
GGTGCCGGCA CGGCCCGGTC CACCATCGCG CGCGGGCTGG CAGCCCTCGC CCGCAAGCTT
GGGGAGGAAT CTTGA
 
Protein sequence
MSLSGTTPDP EIEMLSHGEP LARDRVDVAA LFADHHLGLV RLALLMVGDQ ATAEDVVQEA 
FTRTHAGRHR LRDPRRALTY IRSAVLNGSR SVLRRRAVAF RRAVPYEPPV WSAEHAALLG
EERREVLVAL RALPGRQREA LTLRYYLDLS DLEIAETMGI GAGTARSTIA RGLAALARKL
GEES