| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9179 |
|---|
| Symbol | |
|---|
| ID | 8672525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 10124998 |
|---|
| End bp | 10126377 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase (penicillin- binding protein 4)-like protein |
|---|
| Protein accession | YP_003344541 |
|---|
| Protein GI | 271970345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGTG AGCGGTGGGT GGCCTTGGTC ACTCTCGTCT TGCTGCAGAT TTTCGTCGTC
GCGGCCGGCG CCCACCTGCT GACCAGCGGT CTGCTGGTCG AGAAGGCGCC CGGATCGGCC
GCTCCGGCGG AGCCGCCTCC CGTCCCGGTC ATCACCGCGA GTCCGGTGCT GGCCGCGGGG
GGGAACGGAC CTCTCCCGGC CAAGAGTACT TTGGCGGGGC GGCTCACCGA GGCGTTGGGG
GACCCCGCAC TGGGCGGGAA CGTCGGAGCC GTGGTTCTCG ACGCCGAGAC CGGCGCCACG
TTGTTCGGCA GCGGAGCCGA CGGCGGCGTC ACCCCGGCCT CCACCACGAA GCTGGTCACC
TCGGTCGCCT CGCTGGCCTC GCTGGGGCCT GACGCCAGGT TGAGCACCCG CGTGGTCCGG
GGCTCCTCGC CGGGTTCGAT CGTCCTGGTC GGCGGCGGCG ACCCCACCCT GACGGCCCGC
AAGCCGTCCG CGGTCCCCGC CTACCCCCAG CCGGCCTCGC TCGCCTCCCT CGCCCTGCGT
ACGGCCAGGG CCCTGAAGGC GGCCGGGACC ACCAAGGTGA CGGTGGCCTA CGACGACGGT
CTCTACACCG GGCCGACCAT CTCCCGGACG TGGAAGCCCA ACTACGTGCC CGACGGCGAG
GCAGCCCCCG TCACGGCGCT CATGGTCGAC GAGGGCAGGG TCGCCCCGGG CATCCGCCAG
CGGGTCGCCG ACCCCTCCCG CGCGGCGCAC GGCGCGTTCG TCTCGATGCT GTCGAAGCAG
GGCATCGCGG TCTCCAGATC CGCCCGCCGG GTCAAGGCCC CGGCCGGCGC CCAGGAGATC
GCCCGCGTCG ACTCCGCCCC GGTCTACGCG CTGGTCGAGC GGGCGCTGAC GCTGAGCGAC
AACGACCTGT CGGAGGCCCT GGCCAGGCAG GTGGCGATCA AGGAGGGCAG GCCCGCCTCC
TTCGACGGAG CGGCGGCGGC CGTCCACCAG GTGCTGACCC GACTGAAGGC GGCCGAGGGC
GTGCGGGTCT TCGACGGCAG CGGGCTGTCG CCCCGGAACC GCATCACCCC CATGGGCCTG
GCCCGTCTGA TCGCGGTGGC GGCCTCCCCG GCGAATCCCC GCCTGCACCC GATCGTCAGC
GGCATGCCCA TCGCCGGGTT CAGCGGCACC CTCGGTCACC GGTTCGGCAG GATCCACTCT
GCCTACGGGC TGATCCGCGC CAAGACCGGC ACCCTCAACG GGGTCAGCAC ACTGGCGGGT
ATGACCACCA CCAGGGCCGG CCGGCTGGTG ACTTTCGCCT TCATGGCGGA CGACATCCCC
GCGGGCAGGA ACGCCGAGGC GGCCCTCGAC AGACTCGCCG CCACGGTGGC CGCGAGCTGA
|
|---|
| Protein sequence | MRRERWVALV TLVLLQIFVV AAGAHLLTSG LLVEKAPGSA APAEPPPVPV ITASPVLAAG
GNGPLPAKST LAGRLTEALG DPALGGNVGA VVLDAETGAT LFGSGADGGV TPASTTKLVT
SVASLASLGP DARLSTRVVR GSSPGSIVLV GGGDPTLTAR KPSAVPAYPQ PASLASLALR
TARALKAAGT TKVTVAYDDG LYTGPTISRT WKPNYVPDGE AAPVTALMVD EGRVAPGIRQ
RVADPSRAAH GAFVSMLSKQ GIAVSRSARR VKAPAGAQEI ARVDSAPVYA LVERALTLSD
NDLSEALARQ VAIKEGRPAS FDGAAAAVHQ VLTRLKAAEG VRVFDGSGLS PRNRITPMGL
ARLIAVAASP ANPRLHPIVS GMPIAGFSGT LGHRFGRIHS AYGLIRAKTG TLNGVSTLAG
MTTTRAGRLV TFAFMADDIP AGRNAEAALD RLAATVAAS
|
|---|
| |