Gene Sros_8916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8916 
Symbol 
ID8672254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9848793 
End bp9850292 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID 
Productstreptogrisin C 
Protein accessionYP_003344291 
Protein GI271970095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA GACACGTCAT CACCACGGGA TGCGTTCTGA CGATCACCGC GCTCACGCTG 
ACGGCCGCCC CGGCTGTCGC CACATCTCCC ACCGTGAACA CCTCAGTGGT CCTGTCCGCC
CGGCAACCGC CGCCGGGCAT GATCGAGGCA CTCCAGCGCG ACCTCGGACT CACCAGGGAG
CAGGCGCAGA CCCGCCTGCT CAACGAGGCC CGCCTGAGGC CGGTCGAGGC GAAGCTCCGC
CGGAGGCTCG GTGACCGGTT CGGCGGCTCC TGGTTCACGG GGATCACCGC ACAGGGCCTC
GTGGTGGCCA CCACCAGCTC CGCCGACATT CCCCAGATCC GCGCCGCGGG CGCGCGGGGG
GAGGTCGTCG ACCGGTCGAT GGCGGAGCTC GACGCGACAG TCGAGGAGGT TGACGCGGCC
CTGTCCACCC ACCCGAACGG GCGGGTGCGC TATGTCGACG TGAAGGCCAA CAAGGTCGTC
ATCCTGTCCG ACGCGCCCTC GGCGACCAGA AGCCTCATCG AAGCCGCCGG TGTGGATCCG
GTCGCGGTGC GGGTGGTGCC GTCCGACGAG CAACCCCGCC CCCTCTCCGA CCTGCAGGGC
GGCACCCCTT ACTACATCGG CAGCACGAGT CGCTGCTCGG TCGGCTTCTC GGTGTTGCGC
GGGGCCCAGA ACGGGTTCGT CAGTGCCGGG CACTGCGGCA AGGTCGGTGC CGCCACCGTC
GGGTTCAACC GGGTCGCGCA GGGGGTCTTC CAGGCGTCGA ACTTCCCCGA GAGCGATTTC
GGCTGGGTGG CGGTGAACGA CGACTGGACG CCCAAGCCGC TGGTGGACAA CGGCACCGGC
GGCACCGTGA CCGTCGCCGG CTCGAAAGAG GCCATCGAGG GGGCCTCGGT CTGCCGGTCC
GGCTCCACCA CCGGCTGGCA CTGCGGCACC ATCCAGCAGC GCAACGTCAG CGTCACCTAC
CCGCAGGGCA CGGTCTCCGA GGTGACCCGT ACCAATGTCT GCGCCGAGCC AGGTGACTCC
GGCGGTTCGT TCATCGCCAT CGACCAGGCA CAAGGGGTCA CCTCCGGCGG CTCCGGCGAC
TGCACCTCCG GCGGGGTCAC CTACTTCCAG CCGATCGGGG AGATCCTCAC GACCTACGGC
CTGAGCCTGG TGACCACCGC GGGCAACCCT CCGCCGTTGA GCACGGGCAC CTGCACCGGC
TACGAGCAGA CCATCACCGG CACCCTGAGC AACGGGCAGT CCGTCTACCA GCCGAACAAC
CGTCACTACC GCTCGACCGT CGCCGGTGTG CATGCCGGCT GCCTGGACGC CGACGACGGC
GTTGATCTTG ACCTCTATCT CCAGAAGTGG AACGGCCGCG GCTGGGACAC CGTCGCCACC
GCCGACAGCC CGAGCCCCGA CGAGAAGATC AGCTACACCG GCACGCCCGG CCACTACCGC
TACCGCGTGC CCTCCTCGAA CGGCTCCAGC CCCTACACCC TGGGCTACAA GGCACCGTAA
 
Protein sequence
MSRRHVITTG CVLTITALTL TAAPAVATSP TVNTSVVLSA RQPPPGMIEA LQRDLGLTRE 
QAQTRLLNEA RLRPVEAKLR RRLGDRFGGS WFTGITAQGL VVATTSSADI PQIRAAGARG
EVVDRSMAEL DATVEEVDAA LSTHPNGRVR YVDVKANKVV ILSDAPSATR SLIEAAGVDP
VAVRVVPSDE QPRPLSDLQG GTPYYIGSTS RCSVGFSVLR GAQNGFVSAG HCGKVGAATV
GFNRVAQGVF QASNFPESDF GWVAVNDDWT PKPLVDNGTG GTVTVAGSKE AIEGASVCRS
GSTTGWHCGT IQQRNVSVTY PQGTVSEVTR TNVCAEPGDS GGSFIAIDQA QGVTSGGSGD
CTSGGVTYFQ PIGEILTTYG LSLVTTAGNP PPLSTGTCTG YEQTITGTLS NGQSVYQPNN
RHYRSTVAGV HAGCLDADDG VDLDLYLQKW NGRGWDTVAT ADSPSPDEKI SYTGTPGHYR
YRVPSSNGSS PYTLGYKAP