Gene Sros_8875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8875 
Symbol 
ID8672213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9798586 
End bp9799317 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter-related protein 
Protein accessionYP_003344251 
Protein GI271970055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0534003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGGTCCTGTC GGTCCAGGAG CTCTCGAAGG TGTACGGCGA GGGCGACGCC 
CAGGTCCGTG CCCTGCGAGG GGTCTCCCTC ACCGTCGAGC GGGGCGACTA CGTGGCCATC
ATGGGCGCCT CCGGCTCCGG AAAGTCCACG CTCATGAACA TCCTGGGCTG CCTGGACGTG
CCGTCCTCCG GCCGCTACCT CATCGACGGC GCCGACGTCG GGGCGCTGGA GGAGCGCCAG
CTCGCCGTCC TGCGCAACCG GAAGATCGGC TTCGTCTTCC AGTCGTTCAA CCTGATTCCC
CGGATGAGCG CGCTCGCCAA CGTCGAGCTG CCCATGGCCT ACGGCGGGGT GGGCGCGGCC
GAGCGGCGCG CCCGCGCCCT GGCGGCCCTG GAGCAGGTCG GCCTGGCCGA CCGGGTCCGC
CACGAGCCGA ACGAGCTCTC CGGCGGGCAG CAGCAGCGGG TGGCCGTGGC CAGGGCGCTG
GTCACCGCGC CCTCGCTCCT GCTCGCCGAC GAGCCCACGG GGAACCTCGA CACCACGTCC
ACCGGTGACG TGCTGGAGAT CCTCGACCGG CTGAGCGCCT CGGGCCGGAC AATCGTGATC
ATCACCCACG AGGACGACGT GGCCGCGCAC GCCAAGCGGG TCATACGCCT GGTGGACGGC
CAGATCGTCG AGGACCGCCG CCAGGCTCCC GTCGACGGCC CCCCGCCCCG CATGCCGGAG
GTTCCCGCGT GA
 
Protein sequence
MTTPVLSVQE LSKVYGEGDA QVRALRGVSL TVERGDYVAI MGASGSGKST LMNILGCLDV 
PSSGRYLIDG ADVGALEERQ LAVLRNRKIG FVFQSFNLIP RMSALANVEL PMAYGGVGAA
ERRARALAAL EQVGLADRVR HEPNELSGGQ QQRVAVARAL VTAPSLLLAD EPTGNLDTTS
TGDVLEILDR LSASGRTIVI ITHEDDVAAH AKRVIRLVDG QIVEDRRQAP VDGPPPRMPE
VPA