Gene Sros_8779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8779 
Symbol 
ID8672117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9685728 
End bp9687173 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transport protein 
Protein accessionYP_003344157 
Protein GI271969961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTC CCTCCCCGTC CCAGCCGCTC ACCCGGCGCC GCCATGTCGG CCGGACCCTG 
GCCCTGCTGG CCTTCGCCCA GCTCATCACC TCGCTCGACT TCAACATCGT CTTCGTCGCC
CTCCCCGAGA TCGGCCGGGA CCTCGGCTTC TCCGCCCACA CCCTGCAGTG GGTGACCAGC
GTGTACGCGG TCACCTACGG AGGCTTCCTG CTGCTCGGCG GACGGGCGGC CGACCTGCTG
GGACGCCGGC GTCTGTTCGT CACGGCCCTG CTGCTGTACG CGGTCTCCTC GCTGGTCGGC
GGGCTCGCCG AGAGCTCCGG CCTGCTGGTC GCCGCCCGCG CGGTGCAGGG GCTCGGCGGG
GCGCTGCTCT TCCCCGCCAC CCTGTCGCTG GTCAACACCC TCTTCGCCGA AGGCCCCGAA
CGGAACCGGG CGCTGGCGAT CTGGAGCGGC GCCGGGGCCA GCGGGCTGTC CCTGGGGGCG
CTGCTGGGCG GGGTGCTGAC CGACTCCTTC GGCTGGGAGG CGGTCTTCTA CGTCAACGTC
CCGCTCGCCG GAGGCGCCGC GCTGCTCGCC TACACGCTCA TCCCCGCCGA CGGCGCGCGG
CAGCGGGGCC GCAGCTTCGA CCTGCCCGGC GCGGTGACCG TCACCGCCGG GGTCACCCTG
CTGGCCTTCG CGCTCATCCA GGGCCCCGAG TCCGGCTGGA CCTCGCCGGT CATCCTGGCG
GGCTTCGCCC TCGCAGCCGT GCTGCTGGCG GCCTTCCTCG TCATCGAGGC CCGTAGCCGT
GACCCCCTCA TGCCGCTGCG CCTGCTGGGC AACCGCAGCC TGAGCGGATC GATGGCCATC
ACCCTGATCT TCGGGGCCAC GTTCAACGCC CTGCCGTACT TCCTGACCCT CTACTTCCAG
AGCGTCCACG GCTACAGCCC GCTCGTGACA GGGGCGGCCT TCCTCGTGCC GTCCCTCATG
ATCGCCGCCG GCACCCAGAT CGGCGAGCGG ATGGCCACCC GGACCGGGAT GCGCCTGACC
CTGCTCACCG GCATCGTCGC CGGCGCCGCC GGCACCGCCC TGCTCGCCAC GGGCATGAGC
GCGGGCGGCT CCTACTGGAA CGTGCTGCCC GGCATCGTCG TCATGGGGCT CGGTCAGGGC
CTGACCTGGA CCGGAATGTG GATCGCCGCC GCCTCCGGGG TCGCCGCCGG AGAGCAGGGG
GTCGCCTCCG GCGTGGCGTC CACCGCCCTG CAGGTCGGGA CCGCGCTCGG CCTGGCCGTG
CTCGTCGCGG TCGCCGGCCG GGACGTCACC GGCCTGGCGG GCGAGGCCCT GCTCGGCGAG
ATCACCGGCG GACTGCGGGC CGCGATCTAC GTCGCCGCCG CGGGTATCCT GCTGAGCGCC
TTCCTGGCCC TGACCTTCCA GCGCCGCGAG GCGGCAGAGC CCCGGCCCGC GCGCGTGGAC
GCCTGA
 
Protein sequence
MPSPSPSQPL TRRRHVGRTL ALLAFAQLIT SLDFNIVFVA LPEIGRDLGF SAHTLQWVTS 
VYAVTYGGFL LLGGRAADLL GRRRLFVTAL LLYAVSSLVG GLAESSGLLV AARAVQGLGG
ALLFPATLSL VNTLFAEGPE RNRALAIWSG AGASGLSLGA LLGGVLTDSF GWEAVFYVNV
PLAGGAALLA YTLIPADGAR QRGRSFDLPG AVTVTAGVTL LAFALIQGPE SGWTSPVILA
GFALAAVLLA AFLVIEARSR DPLMPLRLLG NRSLSGSMAI TLIFGATFNA LPYFLTLYFQ
SVHGYSPLVT GAAFLVPSLM IAAGTQIGER MATRTGMRLT LLTGIVAGAA GTALLATGMS
AGGSYWNVLP GIVVMGLGQG LTWTGMWIAA ASGVAAGEQG VASGVASTAL QVGTALGLAV
LVAVAGRDVT GLAGEALLGE ITGGLRAAIY VAAAGILLSA FLALTFQRRE AAEPRPARVD
A