Gene Sros_8711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8711 
Symbol 
ID8672049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9604494 
End bp9605153 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003344091 
Protein GI271969895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.508402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGT TGGAGTCGCA CGGAGACCAC GCGGAGCAGA CCGATGACCG GTCGGTCGGA 
AGACGGGACG GAGCCGTTTC GGTGTTCGTC AGCGCCGCGC CCCGGCTCTT CGCGATCGGT
CTGCGCGTCC TGCAAGACGT GGGCGAGGCC GAGGACGTGG TGCAGGAGAC GTGGCTGCGA
TGGGCCCGCG CCGACCGCTC GGTCGTCATC AGCCCGCCCG CATTCCTTGC GCTGACCACC
ACCAGGCTCG CCATCAACGT CGTCCAGTCC GCCCGCAGGC GCCACGAGAC CTCCGCCGGC
CCCTGGCTTC CCGAGACGAC GGACCGCTCT GTCAGCCCCG AGACGGCAGC CGAACGACGC
GAGGCGGCCG ACACCGCGAT CCGGCTGCTG CTGGAGAGAC TGACCCCCGC CGAACGCGCG
GCCTATCTCC TGCGCGTGGC CTTCGACTAC CCCTACCGCC GGATCTCCGA GATCCTCCAC
CTGGGCGAAG ACCATGCGCG GCAGCTCGTG CGACGCGCCC GCGATCACCT CGCCACCGAG
CGATGCCACC CGGTGAGCGC CACCGCGCAC CGGCGCCTCG TACAGACGTT CCTCGCCGCC
GCGCAGACCG GCGACCTCGC CGAACTGGAA GAACTGCTCG CCACCGGTAT CGCCCGCTAG
 
Protein sequence
MHLLESHGDH AEQTDDRSVG RRDGAVSVFV SAAPRLFAIG LRVLQDVGEA EDVVQETWLR 
WARADRSVVI SPPAFLALTT TRLAINVVQS ARRRHETSAG PWLPETTDRS VSPETAAERR
EAADTAIRLL LERLTPAERA AYLLRVAFDY PYRRISEILH LGEDHARQLV RRARDHLATE
RCHPVSATAH RRLVQTFLAA AQTGDLAELE ELLATGIAR