Gene Sros_8685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8685 
Symbol 
ID8672023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9573901 
End bp9577518 
Gene Length3618 bp 
Protein Length1205 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344069 
Protein GI271969873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACGG CCATCAATCC CCTTCCTGGT ACTCACGAGG ACCGGACCGC CGCTGAGCTT 
CCCGCAGGTA TCACTCTGGT TGGCTCCGAA CTACGTTCCA CCAACCTTGA GCGTGATGTC
CGCGAACCCC ACTTGAACTC CCCCTACGTG GGAGCAAGAG CGCTGGACGT TCTCGATCGT
GTGGCGAACG CGGTCGCTGA CCTCAAGAGG ACACGAGCCT GGTCGTTCAC TGGCCCCTAC
GGCTCAGGTA AGTCGACGCT GTCGAACCTA CTCGACGCCT TCCTGGGACA TGAAACCGCT
CGACAGGCCG AGGCTCGGCA AGCTGTGGAG GCCACCAGTC CAGGCCTAGC GGCACGGTTG
GAACAGGCAC GTGATGACAT TGCCCCAGAG GGTTTCCTGG GAGCGGTGGC GACCGCGCGC
CGCGAGCCGC TGGCCGCTAC CGTGCACCGC GCACTGGCAA CCGCGGCGGA ACGCAAGTGG
GGAAAGCGGC CGCCGAAGGC CGTCGCGCAG GCCCTGCGGA CGTGTGCGGA GCGCGAGGTC
CCGACGACCG AAGATCTCCT CGATGCGCTC ACCGCACTGT GCGACACCGG CCACCCGGTT
CTGCTGATCC TCGATGAGTT CGGCAAGTCG CTGGAATATC TCGCCGCCTC CGGCGACTCG
GGCAGCGCCG AGAACGACGT GTTCCTGTTG CAGATGCTCG CCGAGAAGGG AGCCGGACGC
TCAGGACTGC GGCTGTTCAT TTTCACCCTG CAGCACCTGG CGTTCAGTGA CTACGCAGCA
CGATCCAGCC TGATCCAAAC CAAGGAGTGG GCCAAGGTCC AAGGTCGCTT CGAGGACATC
ACCTTCACGC CGAATTTGGG TGATTCCGTC CACCTTCTTC AAAGACGCCT TGACCAGTCC
GCCGTCACCG AAGTCGGCCA GCAGCTAATC CGTAGCCAGG CGCAAGCTGC TGCACAAGCC
TGGCTTGAGC ACGGGCTGGA TTCCGTAGTG CATATCTCCC CGGAGATGCT CGCCGATCTC
TACCCCTTGC ATCCCCTTAC GGCTGTGGCA GCACCGCTCC TTGCCTTCCA GATTGGTCAG
CATGACCGCA GCCTCGTCGG GTTCCTCACC AACGACGAGC CGAACACGGT CCGTCGCACC
ATCGATGAGG CATCGACCGA CGGACCCGAG CGAGCCTCGA CTATACGGCT GCCCCAGCTG
TACGACTATT TCTTTGCCTC CGGCCGCACC ACCATCCTGG CCTCGGCCAA TGCCAGCCGC
TGGTTGGAGG TTGACAACCG ACTCAACGAG GCGCACGGGC TTCCCCCCGA AGACCGGGAC
ATCCTCAAGA CGATCGGCAT CTTGAATCTC ATCGATGTCG ACGGCGTTCT GCGTGCTACC
CCGGCGATGA TCCAGTTCGC CATGCATGAT CCGACAACCG CCGCAGATCC AGAGCGATTC
AACATGCTGC AAGGGCGGCT GCAGCATCTC GTCGAAACAG GGTTTCTCAC CCATCGGACC
TACAGCAATG AGCACCGGGT CTGGCAGGGC ACCAACATCG ACATCGACGC TCGCGTCAAG
GAAATAGCTG TCCACGTCGC ACCCAGCCAC GTAGTCGATC ACCTCGGTGA GCACCTAGGA
ACGGTTTTGC CCAGGGAGGT GGTCGCCGGA GCGCACATGC AGCGCACCGG GATGCTGAGA
TACTTCCGCA CCGCCATCAG CCTCCAGGCC GACAAACTCG ACGGTCCCGA TGTCGTGAGC
GACGCCGCCG ACGGCATGAT CATCTTCCAT CTCGGGGAGC CAGGCACGCG CCCGCTGGTC
AACTCCCCAC TGCCCGTAAT CATTGGAACC ACCAGAGACC CTGCTGCCAT TCTCGAGGCA
GGGATTACCC TCAGAGCCCT CGAAGACCTC CGGCATCAGG ACGACATTGA CCTCGTGGCT
GGACGCGAGA TCGAAGAACG CATAGCCGAG ATTTCTCAAG AGCTCGGTGC CCGGCTGGAC
GAGGCATTCA ACCCGCGGCG AGACGAGTCC ACCTGGTACC TGTGGAGGAG TGGACAAGAG
ATCCGCACTG AGCAGCGCGA GACCATCGAG GCCCGCAGCT ACGGTGCATT GGTGTCGGCC
GCCTGTGATC GTGTGTATCC GCAGACACCG CACATCCGCA ACGAGATGGC AGGCCGCCAC
GAACTGACCA GCAACGGCGC CCGCGCACGA CGTGTGCTCC TGTCTGACCT AGTGACTAAC
ACAGGTCTGC CGGTGCTGGG ATATGACACC ACCAAGTACT CGCAGGAACG GGCGATGTAC
CACGGCGTCG TGGAATACCT CGGCCTCCAC CGTGCTGCCA AAGAGGTAGA CCAGGCCATT
CAGGCCCAAA CCATCGCCAC ACACGGTGTC TCCCGACCGG ACCCGAAGAA GCATCCAGAG
GTCATTCCTT CCTGGGAGAT GCTTGAGCGG GCACTGACCA ATGCCGCTCG GCCCACCACG
ATCGTCGAGA TCTACCAACA GCTCATGGCG CCCCCCTTCG GCGTCAAGGC CGGCGTCGTG
CCGATTCTGA TGGTCGCCGC GCTGATCCTT CGGAGCACGG ACGTGGCGCT CTTCGAGGAG
GGGAACTACT GTCCGCGGCT CAACCCAGAG ATCATCGAGC GTCTACTTGC CGACACGGGG
CCTGACCGGT TCACTGTCAA AGCCGTGCCC ATCGGGGAAG GGCAGCGCAG CCTGGTTGTT
GACCGCCTTG CCGCAGCCCT CAACGTGGAC GTTCCGCGTT CCCGAACGGC CCGCAATCCC
AAACTGCTGG CAGTGACTCG GGCGATGCTT GAGCGGGTCA TGGTGCTAAC TCCCTACGCG
CTCTACACCA AGCGTCTCAG CCCGGAAGCG CTCAAGGTTC GACAAGTCCT CTCCGCGGCA
ACCGATCCGG ACGAACTGGT CTTCACCGGC CTGCCACAAG CACTTGGGCT CAATGCCATT
CCGGCAAACG CCACGAAAGA CGAGCAGGTC GCCGAGTCGT ATGTCTCTCG CCTGGCTAGC
GCCCTAGGCG CTATCTCAGG GGCCAGCACA GCACTGCGGC AAGACGTAGT GGTCGCGATA
GGCCAGGCCT TCGGTATCGC CGGTGACCTC AAACAAGTAC GCACAGGCCT AGCAGAGGCG
CTTAGCGGCT TCGCCAACGC CTCACTCGAA GTTGATCTGC AGGGATTTGT CTCCCGCGTC
CTTAACACCA GCCTGCCAGA CGAGGACTGG CTTGACCCGA TCATCATTCG CCTCACCAAT
AAGGCGCTTG GTGACTGGAC TGATCAGGAT GTCGACAACT TCCCCCCGCG TGTGAAGGAG
ATGGGCCGCC GGCTCGACCG CGTCGGCCAC CTCTACCAGG CGCAGGAGAC ATCTGTACTT
CAGACACAGG CGCCCGAACC CAAGCAGATC GACACTCACC TACTAACGCT CACGACACCC
CAAGGGACAG AAGTACGCAC GCTCATCCAT GTGCCAAAGC AAGCCAGGAA CACCGCCGAG
ACTCTCGTTG TCGGTGTCAT AAGGCAGGCT GAGCAACAGC TAGGACCCGG CGGTGCGCGC
ATCTTGCTCG CCGCCCTAGC TGAGCGTCTC ACCGCGACGG ACCCTGACCA CGACCCCCAG
GGGGAGGAGA AGCTGTGA
 
Protein sequence
MTTAINPLPG THEDRTAAEL PAGITLVGSE LRSTNLERDV REPHLNSPYV GARALDVLDR 
VANAVADLKR TRAWSFTGPY GSGKSTLSNL LDAFLGHETA RQAEARQAVE ATSPGLAARL
EQARDDIAPE GFLGAVATAR REPLAATVHR ALATAAERKW GKRPPKAVAQ ALRTCAEREV
PTTEDLLDAL TALCDTGHPV LLILDEFGKS LEYLAASGDS GSAENDVFLL QMLAEKGAGR
SGLRLFIFTL QHLAFSDYAA RSSLIQTKEW AKVQGRFEDI TFTPNLGDSV HLLQRRLDQS
AVTEVGQQLI RSQAQAAAQA WLEHGLDSVV HISPEMLADL YPLHPLTAVA APLLAFQIGQ
HDRSLVGFLT NDEPNTVRRT IDEASTDGPE RASTIRLPQL YDYFFASGRT TILASANASR
WLEVDNRLNE AHGLPPEDRD ILKTIGILNL IDVDGVLRAT PAMIQFAMHD PTTAADPERF
NMLQGRLQHL VETGFLTHRT YSNEHRVWQG TNIDIDARVK EIAVHVAPSH VVDHLGEHLG
TVLPREVVAG AHMQRTGMLR YFRTAISLQA DKLDGPDVVS DAADGMIIFH LGEPGTRPLV
NSPLPVIIGT TRDPAAILEA GITLRALEDL RHQDDIDLVA GREIEERIAE ISQELGARLD
EAFNPRRDES TWYLWRSGQE IRTEQRETIE ARSYGALVSA ACDRVYPQTP HIRNEMAGRH
ELTSNGARAR RVLLSDLVTN TGLPVLGYDT TKYSQERAMY HGVVEYLGLH RAAKEVDQAI
QAQTIATHGV SRPDPKKHPE VIPSWEMLER ALTNAARPTT IVEIYQQLMA PPFGVKAGVV
PILMVAALIL RSTDVALFEE GNYCPRLNPE IIERLLADTG PDRFTVKAVP IGEGQRSLVV
DRLAAALNVD VPRSRTARNP KLLAVTRAML ERVMVLTPYA LYTKRLSPEA LKVRQVLSAA
TDPDELVFTG LPQALGLNAI PANATKDEQV AESYVSRLAS ALGAISGAST ALRQDVVVAI
GQAFGIAGDL KQVRTGLAEA LSGFANASLE VDLQGFVSRV LNTSLPDEDW LDPIIIRLTN
KALGDWTDQD VDNFPPRVKE MGRRLDRVGH LYQAQETSVL QTQAPEPKQI DTHLLTLTTP
QGTEVRTLIH VPKQARNTAE TLVVGVIRQA EQQLGPGGAR ILLAALAERL TATDPDHDPQ
GEEKL