Gene Sros_8390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8390 
Symbol 
ID8671724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9261926 
End bp9262594 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003343778 
Protein GI271969582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACG ACACCAGGAG CACCCGCAAG GAGAACCCCG TGACCGCTAC CCCGGACGCC 
AAGCCCCGGG GCACCCGGCT GCCCCGAATG GCCCGTCGCC GCCAGCTGCT CAGCGCGGCG
CAGGAGGTGT TCGTGGAGAA CGGCTACCAC GCGGCCGCGA TGGACGACAT CGCCGAGCGG
GCCGGGGTCA GCAAGCCGGT GCTCTACCAG CACTTCCCGG GCAAGCAGGA GCTCTACCTG
GCCCTGCTCG ACCTGCACGT GGACGACATG ATCGCCCGCT GCCGCGACGC CCTCGCCTCC
ACCACGGACA ACAAGCAGCG CGTCCAGGCC GCGATCGGCG CCTTCTTCGA CTTCGTCTCC
GGTCAGGGCG AGGCGTTCCG GCTGGTCTTC GAGTCCGACC TGCGCAACGT CGCCCCGGTC
CGCCAGCGCA TCGAGCGCAA CCTCCGCGAG AGCGCCGAGA TGATCAGCCA CGTCATCCAG
GAGGACACCG GCTGCTCCAG CGACGAGGCC CGCCTGCTGG GCGTCGGCCT GGTCGGCATG
GCCGAGGTCA GCGCCCGCTA CTGGATCAGC AGCAACGGCT CCATTCCCAA GGACGCCGCC
ACCCAGCTCA TCGCCCGGCT GTCCTGGCGC GGCATCTCGG GTTTCCCCCG GACGACCGCC
GAGCACTGA
 
Protein sequence
MIHDTRSTRK ENPVTATPDA KPRGTRLPRM ARRRQLLSAA QEVFVENGYH AAAMDDIAER 
AGVSKPVLYQ HFPGKQELYL ALLDLHVDDM IARCRDALAS TTDNKQRVQA AIGAFFDFVS
GQGEAFRLVF ESDLRNVAPV RQRIERNLRE SAEMISHVIQ EDTGCSSDEA RLLGVGLVGM
AEVSARYWIS SNGSIPKDAA TQLIARLSWR GISGFPRTTA EH